Pairwise Alignments

Query, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

Subject, 858 a.a., DNA topoisomerase IV subunit A from Synechococcus elongatus PCC 7942

 Score =  378 bits (971), Expect = e-109
 Identities = 225/525 (42%), Positives = 328/525 (62%), Gaps = 23/525 (4%)

Query: 1   MSDSLELS-LDGVERRSLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSEL 59
           M+DS++ +  D +   +L    +++YL Y+M VI+ RALP   DGLKPVQRRI+YAM EL
Sbjct: 1   MTDSIQFNGADRILPTALHQEMQRSYLEYAMSVIVGRALPDARDGLKPVQRRILYAMHEL 60

Query: 60  GLDADAKHKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPD-D 118
           GL  D   +KSAR VGDVLGK+HPHGD A Y+A+V + Q FS RY L+ G GN+G+ D D
Sbjct: 61  GLTPDRPFRKSARVVGDVLGKYHPHGDQAVYDALVRLVQDFSSRYPLLAGHGNFGSIDND 120

Query: 119 PKSFAAMRYTEARLSRYAEV-LLSEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTT 177
           P   AAMRYTE RL+  + V LL E+G+ TVD+V NFD + QEP+VLPA+LP +LLNG +
Sbjct: 121 PP--AAMRYTETRLAPVSHVALLEEIGEETVDFVANFDNSQQEPSVLPAQLPFLLLNGCS 178

Query: 178 GIAVGMATDVPPHNLREVASACVRLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILK 237
           GIAVGMAT++PPHNL E+  A + L+D P+ +   L  ++ GPD+PT  E++  +  IL 
Sbjct: 179 GIAVGMATNIPPHNLGEIVDALIALIDRPQLSDRDLLRYVPGPDFPTGGEVIGSQG-ILD 237

Query: 238 MYESGRGSIRMRAVYRVEDGD----------IVVTALPHQVSGAKVLEQIAAQMQAKKLP 287
            Y  GRGSI +R + R+E+            I+VT LP+QVS A  +E++A  +   KL 
Sbjct: 238 AYLEGRGSIPVRGIARIEEIQPGKGRHRRPVIIVTELPYQVSKAGWIEKVADLVNDGKLQ 297

Query: 288 MVADLRDESDHENPCRIVIIPRSNRVDVDELMQHLFATTDLESTYRVNVNIIGLDGRPQL 347
            +AD+RDESD E   R+VI  R +    D++++ L+  T L+S +   +  I ++G+PQ 
Sbjct: 298 GIADIRDESDREG-MRVVIELRRD-AQADKVLEQLYKRTALQSNFGAILLAI-VEGQPQQ 354

Query: 348 KNLRTLLVEWLEFRTNTVRRRLQHRLDKVEKRLHLLDGLLTAFLNLDEVIHIIRTEE--- 404
            +L+ LL ++L FR  T+RRR  H L++ E+RL +L+GLL +  +LD +I I+R      
Sbjct: 355 LSLKQLLEQFLSFREGTLRRRYGHELEQTERRLMILEGLLRSLSDLDGLIEILRQSPDGG 414

Query: 405 YPKQALIERFELTEIQADYILETRLRQLARLEEMKIRGEQDELLKEQAKLQALLGSEAKL 464
             +  L   F+L E QAD +L   +R++  LE+ +++ E   L ++QA+LQ LLG    L
Sbjct: 415 TARARLQVHFDLNERQADAVLSMPMRRITSLEQEQLQQEAANLREQQARLQTLLGDRPTL 474

Query: 465 RKLVRSELIKDAETYGDDRRSPI-VARAEAKALSENELMPTEPVT 508
            K ++ +L      +G  RR+ +     EA A       P  P++
Sbjct: 475 LKALKKDLRDLKRRFGSPRRTRLPEIPPEAIAAPRQVTAPVAPIS 519