Pairwise Alignments

Query, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

Subject, 758 a.a., DNA topoisomerase IV subunit A from Sinorhizobium meliloti 1021

 Score =  530 bits (1365), Expect = e-154
 Identities = 306/761 (40%), Positives = 447/761 (58%), Gaps = 49/761 (6%)

Query: 10  DGVERRSLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKK 69
           D ++   L    E+ YL Y++  IM RALP + DGLKPV RRI++AMSE+GL  ++  KK
Sbjct: 13  DNIQPVDLKAALEERYLAYALSTIMHRALPDVRDGLKPVHRRIIHAMSEMGLRPNSSFKK 72

Query: 70  SARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTE 129
            AR VGDV+GKFHPHGD + Y+A+V +AQ FS RY +VDGQGN+G  D   + AA RYTE
Sbjct: 73  CARIVGDVIGKFHPHGDQSVYDALVRLAQDFSQRYPVVDGQGNFGNIDGDNA-AAYRYTE 131

Query: 130 ARLSRYAEVLLSEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPP 189
           A+++  A +LL  + Q  VD+ P ++   QEP VLP   PN+L NG +GIAVGMAT +PP
Sbjct: 132 AKMTEVAALLLEGIDQDAVDFRPTYNEEDQEPTVLPGAFPNLLANGASGIAVGMATSIPP 191

Query: 190 HNLREVASACVRLLDEPKATIEQLCEH--------IQGPDYPTEAEIVTPRAEILKMYES 241
           HN  E+  A + L+  P AT+E L           I+GPD+PT   IV  RA + + Y +
Sbjct: 192 HNAHELCDAALHLIKHPDATVEDLLFDPANPQRGGIEGPDFPTGGVIVESRASMAESYRT 251

Query: 242 GRGSIRMRAVYRVED-----GDIVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDES 296
           GRG  R+RA + VED       IVVT +P+QV  ++++E+IA  + A+KLP++ D+RDES
Sbjct: 252 GRGGFRVRARWAVEDLGRGGFQIVVTEIPYQVQKSRLIEKIAELLIARKLPLLEDIRDES 311

Query: 297 DHENPCRIVIIPRSNRVDVDELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVE 356
             +   R+V++P+S  VD + LM+ LF  T+LES   +N+N++ +   P++  L  +L E
Sbjct: 312 AED--VRVVLVPKSRSVDANILMESLFKLTELESRIPLNMNVLSMGRVPRVMALNEVLSE 369

Query: 357 WLEFRTNTVRRRLQHRLDKVEKRLHLLDGLLTAFLNLDEVIHIIRTEEYPKQALIERFEL 416
           WL  R   ++RR +HRL  +++RL +L G L A+LN+DEVI IIR E+ PK  +IERF L
Sbjct: 370 WLAHRREVLQRRSRHRLAAIDRRLEILGGYLIAYLNIDEVIRIIREEDEPKAVMIERFGL 429

Query: 417 TEIQADYILETRLRQLARLEEMKIRGEQDELLKEQAKLQALLGS-------------EAK 463
           T++QA+ IL  RLR L +LEE +IR E D L KE+A+++ALL S             E K
Sbjct: 430 TDVQAEAILNMRLRSLRKLEEFEIRTEFDSLSKEKAEIEALLASGDKQWQAVAWEIGEVK 489

Query: 464 LRKLVRSELIKDAETYGDDRRSPIVARAEAKALSENELMPTEPVTVVLSEKGWVRCAKGH 523
            +    +EL K   T+ D   + + A  +A       ++  EP+TVV+SEKGW+R  KGH
Sbjct: 490 KKFAKATELGKRRSTFSDAPDADVEAIQQA-------MIEKEPITVVISEKGWIRALKGH 542

Query: 524 DIDATGLSYKAGDGFKAAAAGRSNQFAVLIDSTGRSYSLAAHSLPSARGQGEPLTGRLTP 583
             D + L +K GDG K +   ++    ++  + G++Y+L    LP  RG GEPL   +  
Sbjct: 543 IADTSSLQFKDGDGLKVSFPAQTTDKILIFTTGGKAYTLGGDKLPGGRGHGEPLRIMVDM 602

Query: 584 PPGATFECVLLPDDDALYVVASDAGYGFVVKGEDLQAKNKAGKGLL--SLPNGAKVMTPR 641
                     + D     +V+S AG GFVV   D+ A  + GK ++  ++P+ AK++ P 
Sbjct: 603 ENDQDVLTAFVHDPARKLIVSSTAGNGFVVTESDIVANTRKGKQVMNVTMPDEAKLVVP- 661

Query: 642 PVADREQDWLAAVTTEGRLLVFKVSDLPQLGKGKGNKIIGVPGDRVASREEFVTDLAVIP 701
                + D LA V    ++LVF +  +P++ +GKG ++       V+    F      I 
Sbjct: 662 ----VKGDHLAVVGENRKMLVFPLVQVPEMARGKGVRLQRYKDGGVSDIRSF-----AIA 712

Query: 702 EGATLVLQAGKRTLSLKADDLEHYKGERGRRGSKLPRGFQR 742
           EG T    AG R  +   D+L  + G+R   G  +P+GF R
Sbjct: 713 EGLTWEDSAG-RVFTKTRDELIEWMGDRAGAGRVVPKGFPR 752