Pairwise Alignments

Query, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

Subject, 931 a.a., DNA gyrase subunit A from Sinorhizobium meliloti 1021

 Score =  362 bits (929), Expect = e-104
 Identities = 246/737 (33%), Positives = 398/737 (54%), Gaps = 71/737 (9%)

Query: 11  GVERRSLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKS 70
           G+E  S+ +  +++YL+Y+M VI+ RALP + DGLKPV RRI+Y MSELG+D + K+ K 
Sbjct: 15  GIEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKC 74

Query: 71  ARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPD-DPKSFAAMRYTE 129
           AR  GDV+GK+HPHG++A Y+A+  MAQ +S R  L+DGQGN+G+ D DP   AA RYTE
Sbjct: 75  ARVTGDVMGKYHPHGNAAIYDALARMAQDWSLRLPLIDGQGNFGSVDGDPP--AAERYTE 132

Query: 130 ARLSRYAEVLLSEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPP 189
            RL + A  LL ++ + TVD+  N+DGTL EP V+PA+ PN+L+NG  GIAVGMAT++PP
Sbjct: 133 CRLQKAAHSLLDDLDKDTVDFRDNYDGTLHEPVVVPAKFPNLLVNGAGGIAVGMATNIPP 192

Query: 190 HNLREVASACVRLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMR 249
           HNL EV   C+ L+D P   + +L + I GPD+PT A ++  R+ I + YE+GRGS+ MR
Sbjct: 193 HNLVEVIDGCIALIDNPAIELPELMQIIPGPDFPTGA-LILGRSGIRQAYETGRGSVIMR 251

Query: 250 AVYRVED--GD---IVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRI 304
               +E   GD   I++T +P+QV+ A ++E++A  ++ K++  ++DLRDESD +    +
Sbjct: 252 GRAHIEPMRGDREQIIITEIPYQVNKATMIEKMAELVREKRIEGISDLRDESDRQGYRVV 311

Query: 305 VIIPRSNRVDVDELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNT 364
           + + R    +V  ++  L+  T L++++  N+  +   G+P+   L  +L  ++ FR + 
Sbjct: 312 IELKRDANAEV--ILNQLYRYTPLQTSFGCNMVALN-GGKPEQMTLLDMLRAFVSFREDV 368

Query: 365 VRRRLQHRLDKVEKRLHLLDGLLTAFLNLDEVIHIIRTEEYPKQA---LIER-------- 413
           V RR ++ L K  +R H+L GL  A  N+DEVI +IR    P+ A   L+ER        
Sbjct: 369 VSRRTKYLLRKARERAHVLVGLAIAVANIDEVIKLIRQAPDPQTAREQLMERRWPAHDVD 428

Query: 414 ------------------FELTEIQADYILETRLRQLARLEEMKIRGEQDELLKEQAKLQ 455
                             + L+E QA  IL+ RL++L  L   +I  E +++ +E     
Sbjct: 429 ALIRLIDDPRHRINDDATYNLSEEQARAILDLRLQRLTALGRDEIGDELNKIGEEIKDYL 488

Query: 456 ALLGSEAKLRKLVRSELIKDAETYGDDRRSPIVARAEAKALSENELMPTEPVTVVLSEKG 515
            +L S  ++ ++V++EL    + +G  RR+ I        + + +L+  E + V +S  G
Sbjct: 489 DILSSRLRIMQIVKNELTAVRDEFGTPRRTEIA--EGGPDMDDEDLIAQEDMVVTVSHLG 546

Query: 516 WV--------RCAKGHDIDATGLSYKAGDGFKAAAAGRSNQFAVLIDSTGRSYSLAAHSL 567
           ++        R  +      +G++ +  D         ++   +   S G  Y      L
Sbjct: 547 YIKRVPLTTYRAQRRGGKGRSGMATRDEDFVTRLFVANTHTPVLFFSSRGIVYKEKVWRL 606

Query: 568 P--SARGQGEPLTGRLTPPPGATFECVL-LPDDDALY-----VVASDAGYGFVVKGEDLQ 619
           P  + + +G+ L   L   PG     ++ LP+D+  +     + ++  G     K  D  
Sbjct: 607 PIGTPQSRGKALINMLPLEPGERITTIMPLPEDETTWENLDVMFSTTRGTVRRNKLSDFV 666

Query: 620 AKNKAGKGLLSL-PNGAKVMTPRPVADREQDWLAAVTTEGRLLVFKVSDLPQLGKGKGNK 678
             N+ GK  + L   G ++++       E D +   T  G+ + F V+D+       G  
Sbjct: 667 QVNRNGKIAMKLEEEGDEILSVDTCT--EFDDVVLTTALGQCIRFPVADVRVFA---GRN 721

Query: 679 IIGV------PGDRVAS 689
            IGV       GDR+ S
Sbjct: 722 SIGVRGISLGDGDRIIS 738