Pairwise Alignments

Query, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

Subject, 943 a.a., DNA gyrase, subunit A (NCBI) from Rhodospirillum rubrum S1H

 Score =  375 bits (962), Expect = e-108
 Identities = 256/741 (34%), Positives = 397/741 (53%), Gaps = 76/741 (10%)

Query: 16  SLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKSARTVG 75
           S+ D  +++YL+Y+M VI+ RALP + DGLKPV RRI+Y+M E G + +  ++KSAR VG
Sbjct: 17  SIEDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSMKESGYEFNKPYRKSARIVG 76

Query: 76  DVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEARLSRY 135
           DV+GK+HPHGD + Y+AMV M Q F+ R  L+DGQGN+G+ D  ++ AAMRYTEAR+++ 
Sbjct: 77  DVMGKYHPHGDQSIYDAMVRMVQNFAMRLPLIDGQGNFGSMDGDRA-AAMRYTEARMAKA 135

Query: 136 AEVLLSEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPPHNLREV 195
           A  LL ++ + TVD+ PN+D T +EP VLPAR PN+L+NG  GIAVGMAT++PPHNL EV
Sbjct: 136 AHSLLDDIDKETVDFQPNYDETTREPIVLPARFPNLLVNGAGGIAVGMATNIPPHNLGEV 195

Query: 196 ASACVRLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMRAVYRVE 255
             AC  ++D P  T E+L E + GPD+PT   I+  R+ +   + +GRGS+ MR     E
Sbjct: 196 IDACCAMIDNPAVTAEELLELVPGPDFPTGGTIL-GRSGVRAAHLTGRGSVIMRGRTHFE 254

Query: 256 D-----GDIVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRIVIIPRS 310
           D       I+VT +P+QV+ A ++E+IA  ++ KKL  ++D+RDESD      ++ + R 
Sbjct: 255 DISGGRQAIIVTEVPYQVNKASMVEKIAELVREKKLEGISDIRDESDRRGVRVVIEVKRD 314

Query: 311 NRVDVDELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNTVRRRLQ 370
              +V  ++  LF  T L++++ VN+  +   G+P+L  LR ++  ++ FR   +RRR  
Sbjct: 315 AMAEV--VLNQLFRYTPLQTSFGVNMLALN-GGKPELLALRPIIEAFITFREEVIRRRTI 371

Query: 371 HRLDKVEKRLHLLDGLLTAFLNLDEVIHIIRTEEYPKQA-------------------LI 411
             L K  +R H L GL  A  NLD VI +IR    P+ A                   LI
Sbjct: 372 FELGKARERAHTLVGLAIAVANLDPVIKLIREAPDPQAAREGLMARDWPAMDVEPLIKLI 431

Query: 412 ER---------FELTEIQADYILETRLRQLARLEEMKIRGEQDELLKEQAKLQALLGSEA 462
           +          + L+EIQA  IL+ RL +L  LE  K+ GE  E+ ++  +   +L S A
Sbjct: 432 DEPGRMVIDGVYRLSEIQARAILDLRLHRLTGLERDKLHGELIEIGQQIEEYLHILRSRA 491

Query: 463 KLRKLVRSELIKDAETYGDDRRSPIVARAEAKALSENE-------LMPTEPVTVVLSEKG 515
           +L +++R+EL++  E Y   RR+          L ENE       L+  E + V ++  G
Sbjct: 492 RLFEIMRAELVEMKEAYATPRRT---------TLEENEFEHDIEDLIQREEMVVTVTNTG 542

Query: 516 WV--------RCAKGHDIDATGLSYKAGDGFKAAAAGRSNQFAVLIDSTGRSYSLAAHSL 567
           ++        R  +       G+S +  D         ++   +   S G  Y +  + L
Sbjct: 543 YIKRVPLTTYRAQRRGGRGRAGMSMRDEDFVTTIFVVNTHAPLLFFSSDGMVYKMKVYRL 602

Query: 568 P--SARGQGEPLTGRLTPPPGATFECVL-LPDDDALY-----VVASDAGYGFVVKGEDLQ 619
           P  + + +G+ +   +    G     V+ LP+D+  +     + A++ G     +  D  
Sbjct: 603 PLGTPQARGKAMVNIMPLNEGERITTVMPLPEDEGAWDQLDVMFATETGNVRRNRLSDFT 662

Query: 620 AKNKAGKGLLSLPNGAKVMTPRPVADREQDWLAAVTTEGRLLVFKVSDLPQLGKGKGNKI 679
                GK  + L  G  ++      D EQD L   T  G+ + F V D+       G   
Sbjct: 663 NVMSNGKIAMKLDEGDHLIGVATCTD-EQDVL-LTTNLGKAIRFAVGDVRVFA---GRTS 717

Query: 680 IGVPGDRVASREEFVTDLAVI 700
            GV G R+A  ++ V  L+++
Sbjct: 718 TGVRGIRLA-EDDRVNRLSIL 737