Pairwise Alignments

Query, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

Subject, 782 a.a., DNA topoisomerase 4 subunit A from Phaeobacter inhibens DSM 17395

 Score =  494 bits (1271), Expect = e-144
 Identities = 297/761 (39%), Positives = 441/761 (57%), Gaps = 53/761 (6%)

Query: 23  QAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKSARTVGDVLGKFH 82
           + YL Y++  IM RALP   DGLKPV RRI+YAMS L L +     KSA+  GD +G FH
Sbjct: 29  ERYLTYALSTIMHRALPDARDGLKPVHRRILYAMSRLRLTSTGGFLKSAKISGDTMGDFH 88

Query: 83  PHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEARLSRYAEVLLSE 142
           PHGD+A Y+AM  +AQ F+ RY LVDGQGN+G  D     AA RYTEAR++  AE +L  
Sbjct: 89  PHGDAAIYDAMARLAQDFNVRYPLVDGQGNFGNIDGDNP-AASRYTEARMTFVAEAMLEG 147

Query: 143 VGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPPHNLREVASACVRL 202
           + +  VD+  N+DG L EPAVLPA  PNIL NG  GIAVGMAT++PPHN+ E+  AC+ L
Sbjct: 148 LSENAVDFRDNYDGRLTEPAVLPATFPNILANGAAGIAVGMATNIPPHNIGELIDACLHL 207

Query: 203 LDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMRAVYRVED-----G 257
           +  P A  + L  ++ GPD+PT   IV P+  I K Y +GRGS R+R  + VED      
Sbjct: 208 IKTPDARDDTLLNYVPGPDFPTGGIIVEPKENIAKAYNTGRGSFRLRCTHEVEDLGRGQW 267

Query: 258 DIVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRIVIIPRSNRVDVDE 317
            IV+T +P+QV  +K++E+IA  +Q KK+P++AD+RDES  +   RIV+ P+S  VD + 
Sbjct: 268 QIVITEIPYQVQKSKLIEKIAELIQTKKIPILADVRDESAED--IRIVLEPKSKNVDPEV 325

Query: 318 LMQHLFATTDLESTYRVNVNIIGLDG-RPQLKNLRTLLVEWLEFRTNTVRRRLQHRLDKV 376
           LM  +F  +DLE  + +N+N++ +DG  P++ +++ +L  +L+ R + ++RR QHR+DK+
Sbjct: 326 LMNMMFRNSDLEIRFSLNMNVL-IDGVTPKVCSMKEVLRAFLDHRRDVLQRRSQHRMDKI 384

Query: 377 EKRLHLLDGLLTAFLNLDEVIHIIRTEEYPKQAL----------------------IERF 414
           + RL +L+G + AFLNLD VI IIR ++ PK AL                      I   
Sbjct: 385 DHRLEVLEGFIIAFLNLDRVIDIIRYDDDPKAALMRENWSLDHPRAYTEADYVSPAIGAG 444

Query: 415 ELTEIQADYILETRLRQLARLEEMKIRGEQDELLKEQAKLQALLGSE----AKLRKLVRS 470
           ELTE+QA+ IL  RLR L RLEE+++  E+D L +E+A L  LL SE    +++ + ++ 
Sbjct: 445 ELTEVQAEAILNMRLRSLRRLEEIELVRERDALREERAGLVELLASEDLQWSRIAEQLKD 504

Query: 471 ELIKDAETY-GDDRRSPIVARAEAKALSENELMPTEPVTVVLSEKGWVRCAKGHDIDATG 529
              +  +TY G  RR+      E + +    ++  EP+TVV S+ GW+R   GH      
Sbjct: 505 TKKQFGKTYEGGPRRTRFAEAGEVEEVPLEAMIDREPITVVCSQMGWIRAMTGHIDLGRE 564

Query: 530 LSYKAGDGFKAAAAGRSNQFAVLIDSTGRSYSLAAHSLPSARGQGEPLTGRLTPPPGATF 589
           L +K GDG +      +    ++  S GR Y+++A +LP  RG GEPL   +  P     
Sbjct: 565 LKFKDGDGPRFIFHAETTDRLLVFASNGRFYTISASNLPGGRGMGEPLRLMVDLPNEVEI 624

Query: 590 ECVLLPDDDALYVVASDAGYGFVVKGEDLQAKNKAGKGLLSLPNGAKVMTPRPVADREQD 649
             +L+ + +   +VASDAG GF+   +D+ A+ ++GK +L++ +  +      V     D
Sbjct: 625 VDILIHNPEGRLLVASDAGNGFICAEKDIVAQTRSGKQVLNVKDDDRAKICIRVTG---D 681

Query: 650 WLAAVTTEGRLLVFKVSDLPQLGKGKG------NKIIGVPGDRVASREEFVTDLAVI--P 701
            +A V+  G+ LVF V ++P+L +GKG      N   G  G      +  ++D+      
Sbjct: 682 HVAVVSENGKFLVFAVEEMPELTRGKGVRLQKYNMARGKQGS--LELDGGLSDVTTFNWD 739

Query: 702 EGATLVLQAGKRTLSLKADDLEHYKGERGRRGSKLPRGFQR 742
           +G +  +  GK   +    DL  + G+R   G + P GF R
Sbjct: 740 DGISWEMGGGK---TRHETDLGQWLGKRAGIGKRPPYGFPR 777