Pairwise Alignments

Query, 283 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

Subject, 251 a.a., MotA/TolQ/ExbB proton channel (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 33/269 (12%)

Query: 4   IIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTMHVIKKSMK 63
           I+G+ +VF +++GG     G I   +     +I+ G +  A     P +  +   + + K
Sbjct: 10  IVGLAMVFGAIMGG-----GSIWLFVDLHAFMIVVGGSLAAICINFPLNQVLQAFRAASK 64

Query: 64  MFGSR-FSHAFYLEVLGLVYEILNKSRREGMMAIE-ADIEDAAASPIFAKYPTVLADERM 121
               R FS A   +V+  +  I   SRREG+MA+E     DA    +  K   ++AD   
Sbjct: 65  TLMMREFSDA---DVVNSMVRIAELSRREGIMALEHVHTNDA----VLKKACMLIAD--- 114

Query: 122 TAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFGIVAAVL 181
                         N AP  ++    +E+ S+ +      +    +    P  G+   ++
Sbjct: 115 --------------NAAPELIKDSLLIEISSLCKRHSVAQNVFKRLGLLAPSLGLTGTLI 160

Query: 182 GIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEELNLYESI 241
           G+V   A+L +    +IG  +  A++ TF+G + +     P+A  L    + E++  E I
Sbjct: 161 GLVQMFANLDN--PKSIGPAMSVAMICTFYGAMLSNLILTPIAGKLAARTQLEVHRLEII 218

Query: 242 KASLVASASGMPPSLAVEFGRKVLYPKHR 270
                       P L  E     L PK R
Sbjct: 219 FEGAKCILENNNPRLVYEKLSSFLAPKER 247