Pairwise Alignments

Query, 283 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

Subject, 252 a.a., chemotaxis protein MotA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 33/264 (12%)

Query: 1   MAKIIGIIVVF-----ASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTM 55
           +A +IG+ V F     A +LGG  L    + AL      LI+ G   GA L   P    +
Sbjct: 3   LATLIGLAVSFGLIALALLLGGDPLLFADLPAL------LIVLGGTIGATLVNYPIDEAL 56

Query: 56  HVIKKSMKMFGSRFSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTV 115
            ++  +   F    + +   EVL    ++ N++RREG++A+E  +      P   K   +
Sbjct: 57  RMLAIARHAFKGHQTSSE--EVLNQFLDLSNRARREGLLALEPAVR-TLPDPFMRKGLQL 113

Query: 116 LADERMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFG 175
             D                  + P  +E +   E+ +M+   E  +     +    P  G
Sbjct: 114 TVD-----------------GLEPEAIEDILRCEMENMETRHESGAAIFAAMGTYAPALG 156

Query: 176 IVAAVLGIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEEL 235
           ++  V+G+V  +  + D   + IG  +  AL+ TF+G + A   F PL   L H +++E+
Sbjct: 157 LIGTVIGLVQMLKRMND--PSTIGPAMSVALITTFYGAVLANLVFLPLVGKLRHRSRQEI 214

Query: 236 NLYESIKASLVASASGMPPSLAVE 259
            L E   A ++A A G  P +  E
Sbjct: 215 QLMEMQLAGILAIARGENPRIIRE 238