Pairwise Alignments

Query, 346 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

Subject, 312 a.a., Flagellar motor protein from Pseudomonas stutzeri RCH2

 Score =  152 bits (385), Expect = 8e-42
 Identities = 97/280 (34%), Positives = 138/280 (49%), Gaps = 13/280 (4%)

Query: 3   NNQPIIVKR-VKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFQ 61
           N   IIV+R  K+  G  HGGAWK+AFADF  AMMA F+VLW++         A      
Sbjct: 9   NEHEIIVRRRTKKGHGDEHGGAWKVAFADFTLAMMALFMVLWIIQPQMNLTNPAFGDEES 68

Query: 62  DPI-----GFSESGTPYVIDLGGSPEMAPDKTINPEVKTEPTQQSPTQLSKDQVETMAEQ 116
           +P+     G  +  +   ++L G P         PE +   + ++  +L +D     A  
Sbjct: 69  NPLVDGGAGIFDGTSTSPLELDGVPVRQARNEDEPERRRVESDRAEGELPEDGSRRYAST 128

Query: 117 VERERLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQ 176
            E + L  L+QE+  +V+    L+        ++   GLRI I D + R MF  GSA L 
Sbjct: 129 AELQALAALMQEVAGQVDALANLE-------VDVVPQGLRILIKDDQQRFMFQRGSAVLN 181

Query: 177 PYFEDILLAMADTIKAVPNKVSISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGY 236
           P+F  +L  +A  +  V NK+ ISGHTDA PY     Y NW LS +RA  AR  LV+ G 
Sbjct: 182 PHFARLLGVLAGVLAKVENKLIISGHTDATPYRLQSGYDNWNLSGDRALRARNVLVSAGL 241

Query: 237 PDGQVARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKKAQ 276
           P   V +V   A         P +  NRR++I++LT  A+
Sbjct: 242 PGRSVLQVTAQADVMPLRPDAPEDGANRRVEILLLTDSAE 281