Pairwise Alignments

Query, 343 a.a., Putative ribosome biogenesis GTPase RsgA from Pseudomonas putida KT2440

Subject, 351 a.a., ribosome-associated GTPase (RefSeq) from Shewanella amazonensis SB2B

 Score =  296 bits (758), Expect = 5e-85
 Identities = 163/345 (47%), Positives = 221/345 (64%), Gaps = 10/345 (2%)

Query: 3   KRQLNRRQNWRIEKIQGERAARAAKREQHALQELEGGDLGPEQLGLVIAHFGVQVEVEAQ 62
           K+ L+  Q  R+     +R +R     Q    EL+   LG E+  +VI+ FG   +VE  
Sbjct: 4   KKPLSHGQLRRMRANHEKRLSRGKLDNQ--APELQDSSLGQEEPAVVISRFGQHADVEIS 61

Query: 63  DGETAGQVFRCHLRANLPALVTGDRVVWRA----GNQGIGVIVAQMPRSTELCRPNNHGQ 118
            GE    + RC++R  + +LVTGD+V+ R     G+   GV+ A  PR++ L RP+ +  
Sbjct: 62  SGE----IIRCNIRRTIQSLVTGDKVIIRQALEDGSAIGGVVEAVHPRTSSLTRPDLYDG 117

Query: 119 LKPVAANVDLIVIVFAPAPEPHPNLIDRYLVAAEHAGLRPLLLLNKADLINDENGPGLHA 178
           +K +AAN+D I+IV +  P     +IDRYLVA+E  G+ P+++LNK DL+NDE+   + A
Sbjct: 118 VKIIAANIDQILIVSSVVPAFTTQIIDRYLVASEDTGISPVIILNKIDLMNDEDRADIEA 177

Query: 179 LLEVYRELGYPLLEVSAHHGDGMQRLQQQLDGHISVFVGQSGVGKSSLVNSLLPDAGTRV 238
            L  YR LGYP+ EVS+    G+  ++  L+  ISVFVGQSGVGKSS++N+LLPDA    
Sbjct: 178 ALGRYRSLGYPVYEVSSKSKAGIDTVKALLNDKISVFVGQSGVGKSSMINALLPDAELLT 237

Query: 239 GDLSEWSGQGTHTTTTARLYHFPNGGDLIDSPGIREFGLGHVSRDDVEDGFIEFRDLFGT 298
           G++SE SG G HTTTTARL H P+GGDLIDSPG+REF L H+  D V   F EFRD  GT
Sbjct: 238 GEVSEGSGLGQHTTTTARLLHLPSGGDLIDSPGVREFALWHLPPDRVSWCFTEFRDYLGT 297

Query: 299 CRFRDCKHDREPGCALLKALEEGRIKPQRMNSYRSIIASLAEDSY 343
           C+FRDCKH  +PGC+L +ALE G+I   R N+Y  IIASL E  +
Sbjct: 298 CKFRDCKHLDDPGCSLREALEAGKIHQDRFNNYHRIIASLDEQRH 342