Pairwise Alignments

Query, 343 a.a., Putative ribosome biogenesis GTPase RsgA from Pseudomonas putida KT2440

Subject, 295 a.a., ribosome small subunit-dependent GTPase A from Dechlorosoma suillum PS

 Score =  214 bits (544), Expect = 3e-60
 Identities = 133/295 (45%), Positives = 171/295 (57%), Gaps = 13/295 (4%)

Query: 47  GLVIAHFGVQVEVEAQDGETAGQVFRCHLRANLPALVTGDRVVWRAGNQGIGVIVAQMPR 106
           G V+A  G Q  VE   GET      C  R     +  GDRV      +  G I A  PR
Sbjct: 7   GQVVAAHGRQYMVELTGGET----LLCFPRGKKSDIACGDRVEISRPAKDQGAIEAITPR 62

Query: 107 STELCRPNNHGQLKPVAANVDLIVIVFAPAPEPHPNLIDRYLVAAEHAGLRPLLLLNKAD 166
           S+ L R N + Q K +AANV  ++IV A  P     L+ R LVA +  G+   ++LNK D
Sbjct: 63  SSLLYRSNEYRQ-KLIAANVSQVLIVVATEPGFSFELVCRTLVATQDQGVAARIILNKCD 121

Query: 167 LINDENGPGLHALLEVYRELGYPLLEVSAHHGDGMQRLQQQLDGHISVFVGQSGVGKSSL 226
           L  D+  P   AL   +  LG P+LE+SA HG   + L+  L GH S+ VGQSG+GKS+L
Sbjct: 122 LA-DKIAPARQALAP-FVALGVPVLELSALHG--AEALRPLLAGHTSLLVGQSGMGKSTL 177

Query: 227 VNSLLPDAGTRVGDLSEWSGQGTHTTTTARLYHF----PNGGDLIDSPGIREFGLGHVSR 282
           VN+L+P+A     ++SE    G HTTT ARLYH     P  GDLIDSPG+++FGL H+SR
Sbjct: 178 VNALIPEARAATREISEALDSGKHTTTHARLYHLDPAKPEAGDLIDSPGLQDFGLQHLSR 237

Query: 283 DDVEDGFIEFRDLFGTCRFRDCKHDREPGCALLKALEEGRIKPQRMNSYRSIIAS 337
            D+E  F E     G CRFRDC+HDREP CAL  ALE G+I P+R   +R++  S
Sbjct: 238 SDIEHAFAELAPHLGQCRFRDCRHDREPDCALRSALEAGQIDPRRWAVFRTLYQS 292