Pairwise Alignments

Query, 203 a.a., conserved inner membrane protein from Pseudomonas putida KT2440

Subject, 206 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (338), Expect = 9e-37
 Identities = 76/198 (38%), Positives = 111/198 (56%), Gaps = 1/198 (0%)

Query: 1   MLLMLYLIAITAEAMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKH 60
           +L ++ +      A++G L AGR  MD FGV+++A VTA+GGG++RD+ LG  P+ W+K 
Sbjct: 5   LLYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPVFWIKD 64

Query: 61  PEYLVLTSFAALLTIFIAPMMRRLRSLFL-VLDALGLVAFTLIGCMTALEMGQGMLVASI 119
             YL +      LT+ +    +RL    L V DA+GL  F  IG   AL      L+A I
Sbjct: 65  TNYLWVIMITCALTMLLVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSALIAII 124

Query: 120 SGVITGVFGGILRDIFCNDIPLVFRRELYASVSFAAAWFYLGCVYFKVPAEQAMLLTLFG 179
            GVITG  GGI+RD+   +IP+V R E+YA+       F+   +     +  A+L  +F 
Sbjct: 125 MGVITGCGGGIIRDVLAREIPMVLRSEVYATACIIGGIFHTTALAMGYSSSTALLSGVFS 184

Query: 180 GFLVRLLAIRFHWEMPKF 197
             L+RL AIR+H  +P F
Sbjct: 185 TLLIRLGAIRWHLSLPTF 202



 Score = 27.3 bits (59), Expect = 2e-04
 Identities = 13/61 (21%), Positives = 27/61 (44%)

Query: 86  SLFLVLDALGLVAFTLIGCMTALEMGQGMLVASISGVITGVFGGILRDIFCNDIPLVFRR 145
           SL  ++D  G   F + G + A  +        +   +T + GG +RD+     P+ + +
Sbjct: 4   SLLYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPVFWIK 63

Query: 146 E 146
           +
Sbjct: 64  D 64