Pairwise Alignments

Query, 476 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas putida KT2440

Subject, 344 a.a., N-acetylmuramoyl-L-alanine amidase from Synechococcus elongatus PCC 7942

 Score =  127 bits (318), Expect = 8e-34
 Identities = 112/398 (28%), Positives = 170/398 (42%), Gaps = 61/398 (15%)

Query: 7   VAIVGLLLTTVTVEALAVTQVKSMRLWRAPDNTRLVFDLSGPVQHSVFTLSAPDRLVIDI 66
           + +  LLLTTV        Q+   RL       RL F   G +      +  P R+VID+
Sbjct: 8   IGLGSLLLTTVLALPARANQLLFWRL--DASQNRLEFKTQGAIAPQAQLIFNPQRIVIDL 65

Query: 67  NGATLAAPLNVATSNTPISSVRSAQRTPTDLRVVVDLKKSVTPKSFTLAPNAQYGNRLVV 126
            GATL A  +       I  +R  Q      R+V+++        +T+ P+     +L V
Sbjct: 66  PGATLPANRSPIQGGAGIREIRVGQPEAGITRLVIEIAPG-----YTVDPS-----QLRV 115

Query: 127 DLYDQEADAIAASAPPPAPAPVQTPATTPAVPVTPAQPAIKLPPVPSGKRDIVVAIDAGH 186
           +  D     I              P  +P  P    QP +  P  P   R IVV ID GH
Sbjct: 116 EGLDATTWQIRLQPALRFAGGGIVPPRSPVTPPPSRQPQLPPPRSPQVGRQIVV-IDPGH 174

Query: 187 GGEDPGASGSRGQHEKDIVLQIAKELQRQINSEKGFRAELTRTGDYFIPLRKRTEIARKK 246
           GG DPGA G  G  E ++VL I++++   I    G    +TRT D  + L  R +IA + 
Sbjct: 175 GGPDPGAIGINGLQEAELVLDISQQV-AAILRNSGLDVRMTRTADIDLDLEPRVQIAEQA 233

Query: 247 GADLFISIHADAAPSRAAFGASVFALSDRGATSETARWLADTENRSDLIGGAGNVSLDDK 306
            AD+F+SIHA+A    +     V  L      S+    LA T ++S L     +VS+ D+
Sbjct: 234 RADIFVSIHANAL---SLDRPEVNGLETYYYASQAGERLARTIHQSIL----SSVSIRDR 286

Query: 307 DRMLAGVLLDLSMTATLSSSLNVGQKVLGNMGRVTSLHKQRVEQAGFMVLKSPDIPSILV 366
                                                    V QA F V++   +P++LV
Sbjct: 287 G----------------------------------------VRQARFYVIRRTTMPAVLV 306

Query: 367 ETGFISNNNEAAKLASSSHQQALARSIRTGVHQYFQQN 404
           ETGF++ + ++  LA+ +H++ +A +I  G+ QY +QN
Sbjct: 307 ETGFVTGSEDSRNLANPNHRRKMAEAIARGILQYVRQN 344