Pairwise Alignments

Query, 476 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas putida KT2440

Subject, 436 a.a., putative N-acetylmuramoyl-L-alanine amidase AmiC from Phaeobacter inhibens DSM 17395

 Score =  152 bits (383), Expect = 3e-41
 Identities = 118/368 (32%), Positives = 186/368 (50%), Gaps = 26/368 (7%)

Query: 39  TRLVFDLSGPVQHSVFTLSAPDRLVID---INGATLAAPLNVATSNTPISSVRSAQRTPT 95
           T +   LS  V + +FTL+AP R+V+D   ++ + L+A   V      I++ +     P 
Sbjct: 70  TNITLGLSQGVPYRLFTLAAPPRVVLDFQEVDWSGLSAQALVTEDG--ITAAQFGTYVPG 127

Query: 96  DLRVVVDLKKSVTPKSFTLAPN-AQYGNRLVVDLYDQEADAIAASAPPPAPAPVQTPATT 154
             R+V+ L + +  ++  +  +      RL + L +  A+  AA+   P  A    PA T
Sbjct: 128 WSRLVLALAQPMQIETAAMDIDPVTAAARLSMALRETTAEEFAATTGAPRDARWDLPAPT 187

Query: 155 PAVPVTPAQPAIKLPPVPSGKRDIVVAIDAGHGGEDPGAS----GSRGQHEKDIVLQIAK 210
           P +     +    L P       +++ ID GHGG DPGA     G   Q EKD++LQ A 
Sbjct: 188 PMIA---REAKDSLAP-------LLIVIDPGHGGIDPGAEAFLQGGLVQ-EKDLMLQFAI 236

Query: 211 ELQRQINSEKGFRAELTRTGDYFIPLRKRTEIARKKGADLFISIHADAAPSRAAFGASVF 270
           EL   +     F  +LTR  DYF+ L +R  +A +  ADLF+S+HAD+     A G +V+
Sbjct: 237 ELGEMLVRSGQFNVQLTRDDDYFVSLERRIALAHQAKADLFLSLHADSLSEGRAHGTTVY 296

Query: 271 ALSDRGATSETARWLADTENRSDLIGGAGNVSLDDKDRMLAGVLLDLSMTATLSSSLNVG 330
            LSD  + + +A  L + + R DL+ G      DD+   +  VLLDL+   T   S  + 
Sbjct: 297 TLSDDASDAASAT-LVERQERGDLLAGTDLSQADDR---VTDVLLDLARVETHPRSQALA 352

Query: 331 QK-VLGNMGRVTSLHKQRVEQAGFMVLKSPDIPSILVETGFISNNNEAAKLASSSHQQAL 389
           +  V G   +  +++++ + +AGF VLKS DIPS LVE GF+S+  + A L     ++  
Sbjct: 353 RALVKGLKSQGGAMNRRPLREAGFSVLKSADIPSALVEVGFLSSPRDLANLMDPEWRERT 412

Query: 390 ARSIRTGV 397
           AR I  G+
Sbjct: 413 ARGILNGL 420