Pairwise Alignments

Query, 323 a.a., tRNA dimethylallyltransferase from Pseudomonas putida KT2440

Subject, 306 a.a., tRNA delta(2)-isopentenylpyrophosphate transferase from Synechococcus elongatus PCC 7942

 Score =  194 bits (493), Expect = 2e-54
 Identities = 121/310 (39%), Positives = 172/310 (55%), Gaps = 21/310 (6%)

Query: 4   KPPAIFLMGPTAAGKTDLAIELTTVLPCELISVDSALVYRGMDIGSAKPSKEVLAAHPHR 63
           KP  I L GPTAAGK+ LAI +   L   ++S DS LVYR  +IG+AKP+       PH 
Sbjct: 6   KPGLIVLCGPTAAGKSSLAIAIAQRLGSPILSADSRLVYRDFNIGTAKPTPAEQQQVPHY 65

Query: 64  LIDILDPAQSYSAAQFRADALEAMAEITARGKIPLLVGGTMLYYKALIDGLADMPAADAT 123
           L+D+ DP Q ++   ++  A+  + ++  +G +PLLVGGT LY KA+++GL     A   
Sbjct: 66  LMDLCDPRQVFTVGDYQDCAVPLIQQLQEKGMLPLLVGGTGLYIKAIVNGLRFPRIAP-- 123

Query: 124 VRAELEAQAEALGLAELHRQLAEVDPESAARIHPNDPQRLIRALEVYRVSGESMTAHRRR 183
            + +L +Q +ALG    H  L  VDP +  RIH ND  R +RALEV+ VSG+ +T  ++ 
Sbjct: 124 -QPKLRSQLQALGQPLCHALLQRVDPVAGDRIHVNDRVRTLRALEVFYVSGDRLTDLQQE 182

Query: 184 QFAESRGADAGAGGHLPYTVASLAIAPTDRHILHQRIALRFSQMLEQGFVDEVRSLRARS 243
           Q               P +   L I   D   L  RI  R  QML  GFV+EV+ L  R 
Sbjct: 183 Q---------------PPSYPILQIG-LDSDRLEARIQQRTQQMLTSGFVEEVQGLCDR- 225

Query: 244 DLHAGLPSIRAVGYRQVWDYLDGKLTENEMRERGIIATRQLAKRQFTWLRGWPEVHWLDS 303
              + LP +  +GYRQV  +L G L+ +E+ E+ ++ TRQ AK+Q TW R    + W+D+
Sbjct: 226 -YGSDLPLLNTLGYRQVCAFLQGSLSRSELPEQIVLQTRQYAKQQRTWFRADSSIQWIDA 284

Query: 304 LACDNLSRTL 313
            A + L R L
Sbjct: 285 EASNRLERAL 294