Pairwise Alignments

Query, 644 a.a., putative methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (459), Expect = 8e-50
 Identities = 121/354 (34%), Positives = 193/354 (54%), Gaps = 8/354 (2%)

Query: 294 LGLVVVGLGVLLVVALVLGRRVLSKLRLLIAALNDLAAGEGDLTKRVTLDSRDEIGDMAS 353
           +GL VVGL   ++   VL  R ++ L+ ++++L  +AAG GDLT R+ ++S+DEIGD+A 
Sbjct: 214 IGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAK 273

Query: 354 AVNRFVDKLQPI---VREAGEVAQRTGVEIGAMAQRNAGADAAAALQRDEVAASLRDLSS 410
           A N F+DKL P+   +R +    +    E+     + +       L+ D+V A++ ++S+
Sbjct: 274 AFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSA 333

Query: 411 MADEAQAESHAMQAALQQV-VDIRQATDENSRSSTQLASLIENLAGQVETGSQVIERLAK 469
            A E  + +++   A++     I  A  E + +   +  L+     +V   S  +  L++
Sbjct: 334 TAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVN----EVNQTSAAVGDLSQ 389

Query: 470 QSEQIEVVLTVIHGIAEQTNLLALNAAIEAARAGETGRGFAVVADEVRALASKTQSSTGD 529
           Q+ +I  VL VI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LAS+TQ+ST +
Sbjct: 390 QAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKE 449

Query: 530 IQAHITALQKGAKEAVATISQAGLKASEGLLVLRDNERRQQSVQAAVEQVHAAIGLATRA 589
           I   + AL +G  +AV +++ +  +  +  L     +     +  AV  +H        A
Sbjct: 450 IGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASA 509

Query: 590 AEQQAHGAQAVRGRVENIHAQAERSAEVVMQTTASSKVLDDLAAQLRASLGQFR 643
           AEQQ+  A+ +   +  I       +E   QT + S  L     Q+   +G F+
Sbjct: 510 AEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFK 563