Pairwise Alignments

Query, 521 a.a., Iron ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 543 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  178 bits (451), Expect = 5e-49
 Identities = 151/558 (27%), Positives = 264/558 (47%), Gaps = 81/558 (14%)

Query: 20  PSIWVVLPVLFLVAMSLLPLAYVAIKAW---EAGWREALHLLWRPFVWGLMRNTLLLMVG 76
           P  W  L  L  +  +L PL  + I+A    EA +   +  +   +++    NTL LM+ 
Sbjct: 6   PKSWSTLSYLTAICFAL-PLGAICIQAMVPDEAVFGHLMQTVLPTYIF----NTLALMLF 60

Query: 77  VTLTCMVVGLALAWLLERSNLAGRRLWGVVLCLPFAVPSFVSSFTWVSLSS--------- 127
           V+L  +++ +  AW + R +  GR  +   L LP A+P++V ++ +  L           
Sbjct: 61  VSLGALLIAVPAAWCVARCDFPGRNGFQWALLLPLAMPAYVVAYVYTDLLDYAGPIQTWL 120

Query: 128 ---------------DFEGLGGAIMVMALSKYPLVFLPVAATLRNLDTSLEESARTLGCS 172
                          D   LGGA +++AL  +P ++L           SL  ++R +G  
Sbjct: 121 RQVNGWLSPTDYYFPDVRTLGGASVMLALVLFPYIYLLARTAFMEQSPSLLHASRVMGAG 180

Query: 173 RWGVFSKVTLPLLWPSMLGGALLIALHMLVEFGALSILGLQTFTTAIYQQFELEFSNANA 232
            W  F ++ LP+  P++  GA L+A+    +F  +S   + T TTA+Y  +    S A A
Sbjct: 181 PWRSFWRLNLPMARPALAVGAALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGSLAAA 240

Query: 233 AMLSAVLLAMCLAMLWLELRVRGKARHVRIGQGVARRAQPVR---------LRGWAVLAQ 283
           A LSA++L +   ++       G  R  R  Q + ++  P+          ++ W  LA 
Sbjct: 241 AKLSAIILLVVFCLI-------GAERFARRKQQLFQKQTPITSHERYALSGVKAW--LAA 291

Query: 284 LFCVGLAVLGSGIPL-AMLGY---WLSVGSSAAFPVAAISKALFTSLSVSLGGAGFCVLL 339
            +C  L +L  G+P+  +LGY   +  V  + AF   +++ +L  +L VSL      V+ 
Sbjct: 292 GYCAVLLLLAFGLPVWVLLGYAWDYFDVSWNQAFWEYSLN-SLIIALVVSL----VTVVF 346

Query: 340 ALPISFLVVRYKGRLAIWAERLPYLLHALPGLVIA------LTLVFFALHYVPALYQ--- 390
           AL + F+      ++ I   RL    +ALPG V+A      L+L+ FA++ + A +    
Sbjct: 347 ALLLMFVRRCSPRKIDILPSRLASTGYALPGTVLAIGVLVPLSLLDFAVNDLYAYFDQSG 406

Query: 391 -------TTALLLLAYALLFLPLAQSPVRTALNKASPTLEEAARTLGASSFAAFCRVTLP 443
                  T  +L+ A+A+ F  +A   +  +  + SP+L+ A+ T+G    A   R+ LP
Sbjct: 407 PGLIFSGTLFVLIFAFAIRFAAIAIGSIENSYKQISPSLDMASVTMGMRPSAILSRIHLP 466

Query: 444 IIFPAMAAAFALVFLDAMKELTATLLLSPTGMTTLATEVWAHTANVEFAAAAPYAALLIV 503
           ++   + AA  LVF++ MKEL A LLL P G   LAT V+   ++ +    A  A ++++
Sbjct: 467 LLRSGIFAAILLVFIECMKELPAALLLRPVGFENLATYVYQFVSDEQLEQGALGAIVIVL 526

Query: 504 VSGLPVYLLTTRMYLNKA 521
           V  +P+      +YLN++
Sbjct: 527 VGLIPL------IYLNRS 538