Pairwise Alignments

Query, 521 a.a., Iron ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  164 bits (416), Expect = 6e-45
 Identities = 147/543 (27%), Positives = 251/543 (46%), Gaps = 69/543 (12%)

Query: 28  VLFLVAMSLLPLAYVAIKAWEAGWREALHLLWRPFVWGLMRNTLLLMVGVTLTCMVVGLA 87
           +  L+ + LL L   A +  EA +   L  +   ++     N+L L++ V++  +++ L 
Sbjct: 16  IAVLLVLPLLALLLQAAQPDEAVFGHLLSTVLPTYI----ANSLWLILWVSIGSLLLALP 71

Query: 88  LAWLLERSNLAGRRLWGVVLCLPFAVPSFVSSFTWVSLSS-------------------- 127
            AWL+ R    GRR     L LP A+P+++ ++ +  L                      
Sbjct: 72  CAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRSLRALFGWSSPQD 131

Query: 128 ----DFEGLGGAIMVMALSKYPLVFLPVAATLRNLDTSLEESARTLGCSRWGVFSKVTLP 183
               D   LGGA  V++L  +P ++L           +L  ++R +GCS W  F +++LP
Sbjct: 132 YFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLAHASRIMGCSPWQSFWRLSLP 191

Query: 184 LLWPSMLGGALLIALHMLVEFGALSILGLQTFTTAIYQQFELEFSNANAAM-LSAVLLAM 242
           +  P++  G  L+A+    +F  ++   + T TTA+Y  + L + N  AA  LSA++L +
Sbjct: 192 MARPALAVGVALVAMETAADFATVNYFAVPTLTTAVYDTW-LGYGNLTAAAKLSAIILLV 250

Query: 243 CLAMLWLELRVRGKA----RHVRIGQGVARRAQPVR-LRGWAVLAQLFCVGLAVLGSGIP 297
             +++ +E   R K     +  RI      R  P++ L G      L  +   VL SGI 
Sbjct: 251 VFSLIGVERFARRKQQLFQKQSRIQAIDLYRLSPMQTLLGLGYCGMLLLLAF-VLPSGIL 309

Query: 298 LAMLGYWLSVGSSAAF---PVAAISKALFTSLSVSLGGAGFCVLLALPISFLVVRYKGRL 354
           L+    +        F    V +++ AL TSL         C ++AL + F+        
Sbjct: 310 LSYAINYFEQSWDPLFWQLSVNSLTLALITSL--------VCCVIALVLMFIRRVSPRSS 361

Query: 355 AIWAERLPYLLHALPGLVIA------LTLVFFALHYV--------PALYQT--TALLLLA 398
                RL    +ALPG V+A      LTL+ FA++ +        P L  T  T  L+ A
Sbjct: 362 DALPSRLASTGYALPGTVLAIGVLVPLTLLDFAINDIADWLGMAGPGLLLTGSTVALVFA 421

Query: 399 YALLFLPLAQSPVRTALNKASPTLEEAARTLGASSFAAFCRVTLPIIFPAMAAAFALVFL 458
           + + F+ +A   V ++  + SP+L+  + TLG S      RV LP++   + A   LVF+
Sbjct: 422 FCVRFVAIAIGSVESSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGALLVFI 481

Query: 459 DAMKELTATLLLSPTGMTTLATEVWAHTANVEFAAAAPYAALLIVVSGLPVYLLTTRMYL 518
           ++MKEL A LLL P G   LAT V+   ++ +    A  A ++++V  +P+      +YL
Sbjct: 482 ESMKELPAALLLRPIGFENLATYVFQFVSDEKLEHGALPAIVIVLVGLVPL------IYL 535

Query: 519 NKA 521
           N++
Sbjct: 536 NRS 538