Pairwise Alignments

Query, 521 a.a., Iron ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 559 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  175 bits (444), Expect = 3e-48
 Identities = 160/554 (28%), Positives = 249/554 (44%), Gaps = 49/554 (8%)

Query: 3   AALSEPVPVRFVPSR---KRPSIWVVLPVLFLVAMSLLPLAYVAIKAWEAGWREALHLLW 59
           A LS+P   R V SR   +R +  +    L L A+ LLP+  V I A   G  + L  L 
Sbjct: 2   ATLSDPSGERPVKSRARKRREARLLGTGALVLAALCLLPMLAVLITALSGG-TDTLAQLA 60

Query: 60  RPFVWGLMRNTLLLMVGVTLTCMVVGLALAWLLERSNLAGRRLWGVVLCLPFAVPSFVSS 119
              + G    TL L+V V     ++G + AWL+      GRR   V+L LP A P++V +
Sbjct: 61  DTVLPGYTGATLALVVLVGTGTFMIGTSTAWLISMYEFPGRRWLEVLLVLPLAFPAYVLA 120

Query: 120 FTWVSLSS-----------------------DFEGLGGAIMVMALSKYPLVFLPVAATLR 156
           + +  +                         +   LGGA  ++ L  YP V+L   A   
Sbjct: 121 YAYTHVLDHPGIVQATLRSVMGWGPRDYWFPEIRSLGGAAAMLILVLYPYVYLLARAAFV 180

Query: 157 NLDTSLEESARTLGCSRWGVFSKVTLPLLWPSMLGGALLIALHMLVEFGALSILGLQTFT 216
               +   +AR LG + +  F +V++P+  P++  G LL  +  + +FG +S  G+ TF 
Sbjct: 181 QQSATTFFAARALGRTPFRAFLEVSMPMARPAIAAGVLLATMETIADFGTVSYFGVHTFA 240

Query: 217 TAIYQQFELEFSNANAAMLSAVLLAMCLAMLWLELRVRGKARHVRIGQGVARRAQP-VRL 275
           T IY  +        A+ L+  LL   L +  LE + RG A++     G  + A P   L
Sbjct: 241 TGIYTSWFNMGDRVAASQLALGLLGFALLLAVLERQSRGSAKY---HGGKRQEAMPRTTL 297

Query: 276 RGW-AVLAQLFCVGLAVLGSGIPLAMLGYWLSVGSSAAFPVAAISKALFTSLSVSLGGAG 334
            GW    A + C    +LG  IP+  L   + +GS          + +  SL+++   A 
Sbjct: 298 TGWHRWSATILCGAPVLLGVAIPIVTL-LVMGIGSEQNLLSRRYIRFITNSLTLASAAAV 356

Query: 335 FCVLLALPISFLVVRYKGRLAIWAERLPYLLHALPGLVIAL-TLVFFALH------YVPA 387
             V  A+ + +      G  +  A  +  L +A+PG VIA+  LV FAL       ++ A
Sbjct: 357 LTVCAAVILGYYQRVRPGPRSDAALYIARLGYAIPGGVIAVGLLVPFALFDNTLDAWMRA 416

Query: 388 LYQTTALLLL---------AYALLFLPLAQSPVRTALNKASPTLEEAARTLGASSFAAFC 438
            +  +  LLL         AY + FL  A           +  L+ AAR LG +++    
Sbjct: 417 NFDLSTGLLLTGSIWLLVGAYMIRFLAAALGAYEGGQATINLNLDYAARVLGQTAYGTLR 476

Query: 439 RVTLPIIFPAMAAAFALVFLDAMKELTATLLLSPTGMTTLATEVWAHTANVEFAAAAPYA 498
           RV LPI+ P++  A  +VF+D MKEL ATL++ P    TLA + +   ++     AA  +
Sbjct: 477 RVHLPILTPSLLTALLIVFVDVMKELPATLIMRPFNYDTLAVQAYRLASDERLEGAAVPS 536

Query: 499 ALLIVVSGLPVYLL 512
            L++ V  LPV LL
Sbjct: 537 LLIVAVGLLPVILL 550