Pairwise Alignments

Query, 857 a.a., exoribonuclease R from Pseudomonas putida KT2440

Subject, 773 a.a., RNA-binding transcriptional accessory protein from Vibrio cholerae E7946 ATCC 55056

 Score = 52.8 bits (125), Expect = 8e-11
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 12/109 (11%)

Query: 664 VGETFPGVITAVTGFGLFVELTDIYVEGLVHVSALPGDYYHFDPVHHRLAGERTGRSFRL 723
           VG    GV++ V  FG FV++  ++ +GLVH+SAL  D +  DP              + 
Sbjct: 650 VGMVLEGVVSNVANFGAFVDI-GVHQDGLVHISALT-DRFISDP----------REVVKA 697

Query: 724 GDTIEVKVMRVDLDERKIDFEVSEKTLAAPIGRKQRGAAPVAEKAEQQP 772
           GD ++VKVM VD+  ++I   +          R QR AAP + +  + P
Sbjct: 698 GDIVKVKVMEVDVQRKRIALSMRLNDEPGQDNRSQRSAAPRSGQERRAP 746