Pairwise Alignments

Query, 857 a.a., exoribonuclease R from Pseudomonas putida KT2440

Subject, 815 a.a., exoribonuclease R from Klebsiella michiganensis M5al

 Score =  783 bits (2023), Expect = 0.0
 Identities = 414/830 (49%), Positives = 550/830 (66%), Gaps = 28/830 (3%)

Query: 6   SLDPEAAREAEKYDNPIPSRELILQRLADRGEPAAREELAKEFGLYEEDQIEALRRRLRA 65
           S DP   RE+EKY NPIPSRE IL  LA R +PA+R+ELA E  +  E+Q EALRRRLRA
Sbjct: 2   SQDPFLDRESEKYANPIPSREFILDHLAKREKPASRDELATELNIEGEEQQEALRRRLRA 61

Query: 66  MERDGQLIYTRRGTYAPVDKLDLICGRVSGHRDGFGFLIPDDGSEDLFLSPSQMRLVFDG 125
           MERDGQL++TRR  YA  ++LDL+ G V GHRDG+GFL  +   +DL+LS  QM+    G
Sbjct: 62  MERDGQLVFTRRQCYALPERLDLLKGIVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIHG 121

Query: 126 DRGLARVSGVDRRGRREGVLVEVISRAHESVVGRYFEEGGIGYVTPDNPKIQQEVLVTAG 185
           D+ LA+  G DR+GRRE  +V V+      +VGRYF + G+G+V PD+ ++  ++L+   
Sbjct: 122 DQVLAQPLGADRKGRREARIVRVLVPKTGQIVGRYFTDAGVGFVVPDDSRLSFDILIPPE 181

Query: 186 RNGGAKIGQFVEIKITHWPTPRFQPQGDVVEVIGNYMAPGMEIDVALRSYDIPHVWPNDV 245
           +  GA++G  V +++T  PT R +  G +VEV+G+ M  GM +D+ALR+++IP+VWP  V
Sbjct: 182 QIMGARMGFVVVVELTQRPTRRTKAIGKIVEVLGDNMGTGMAVDMALRTHEIPYVWPPAV 241

Query: 246 VKEARKFRSEVEEKDKEKRVDLRHLPFVTIDGEDARDFDDAVYCEPLGKLRLFSGGWRLY 305
            K+    + +V E+ K+ RVDLR LP VTIDGEDARDFDDAVYCE     +   GGWRL+
Sbjct: 242 EKQVAGLKEQVPEEAKKGRVDLRSLPLVTIDGEDARDFDDAVYCE-----KKRGGGWRLW 296

Query: 306 VAIADVSSYVRLGSALDVEAQQRGNSVYFPERVVPMLPEELSNGLCSLNPHVDRLAMVCE 365
           VAIADVS YVR G+ LD EA+ RG SVYFP +VVPMLPE LSNGLCSLNP VDRL MVCE
Sbjct: 297 VAIADVSYYVRPGTPLDGEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCE 356

Query: 366 MTMNKAGQMVDYQFYEGVIHSHARLTYNKVSSMLEHSRTREGKALREEYKEVVPDLKNLY 425
           MT++  G++  ++FYE V+ SHARLTY KV  ML+  +      LRE+Y  +V  ++ L+
Sbjct: 357 MTISAKGRLTGFKFYEAVMSSHARLTYTKVWHMLQGDQD-----LREQYAPLVKHIEELH 411

Query: 426 NLYKVLVEARHTRGAIDFETQETRIIFGEERKIAEIRPTVRNDAHKLIEECMLAANVATA 485
           NLYKVL  AR  RG I FE++E + IF  ER+I  I  T RNDAHKLIEECM+ AN++ A
Sbjct: 412 NLYKVLDGAREERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAA 471

Query: 486 EFLQKHGVPALYRVHDGPPPERLEKLRAFLGELGLSLHKGKDPSPKDYQALLASIAGRPD 545
            F++K   PAL+R+HD P  E +   R+ L ELGL L  G  P P+DY  LL SIA RPD
Sbjct: 472 RFVEKAEEPALFRIHDKPSTEAITAFRSVLAELGLELPGGNKPEPRDYAELLTSIADRPD 531

Query: 546 FHLIQTVMLRSLSQAVYSTENNGHFGLNYEAYTHFTSPIRRYPDLLVHRAIRSIIRSKVD 605
             ++QT++LRS+ QA+Y  EN GHFGL  ++Y HFTSPIRRYPDL +HRAI+ ++     
Sbjct: 532 AEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAK--- 588

Query: 606 TPHVKRAGAMSIPKARIYPYDENTLEQLGEQCSMTERRADEATRDVVNWLKCEFMKDRVG 665
               ++    +  +   + Y  + + QLG  CSMTERRADEATRDV +WLKC+FM D+VG
Sbjct: 589 ----EQGHKGNSTETGGWHYSMDEMLQLGAHCSMTERRADEATRDVSDWLKCDFMLDQVG 644

Query: 666 ETFPGVITAVTGFGLFVELTDIYVEGLVHVSALPGDYYHFDPVHHRLAGERTGRSFRLGD 725
             F GVI +VTGFG FV L +++++GLVHVS+L  DYY FD V  RL GE  G+++RLGD
Sbjct: 645 NVFKGVIASVTGFGFFVRLDELFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGD 704

Query: 726 TIEVKVMRVDLDERKIDFE-VSEKTLAAPIGRKQR-----GAAPVAEKAEQQPATEAKAT 779
            +EV+V  V++DERKIDF  +S +     +G+ +R     GA   +    +Q   +    
Sbjct: 705 RVEVRVEAVNMDERKIDFSLISSERAPRNVGKTEREKAKKGAGGKSSGRRRQAGKQVNFE 764

Query: 780 PKPRSRKSEASEAYFPKDAV---QRNAEVRKSREMKKALMTDARSSAGSK 826
           P    RK +      PK A    ++ A+    +  K A  T A+ +A  K
Sbjct: 765 PDSAFRKQKGQSQ--PKSAQPKGEKKAKKPSEKTQKIAAATKAKRAAKKK 812