Pairwise Alignments

Query, 248 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Pseudomonas putida KT2440

Subject, 258 a.a., putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Phaeobacter inhibens DSM 17395

 Score =  134 bits (336), Expect = 2e-36
 Identities = 94/241 (39%), Positives = 138/241 (57%), Gaps = 15/241 (6%)

Query: 7   IYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMDAWVE- 65
           ++G+HAV+  L + PKR K   +    +E +L   +A   ++ V     + R+ +  ++ 
Sbjct: 25  LFGLHAVRDALLN-PKREKLRLMVTQNAEAKLADAIA---QSGVEAEVIDPRKFNPPIDK 80

Query: 66  -GVHQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGAT 124
             VHQG   EV P   WG L  +E     E P  +L+LD VTDPHN+GA LR+A+  GA+
Sbjct: 81  QSVHQGAALEVKPLN-WGGL--DENCIGAEVPR-VLLLDRVTDPHNVGAILRSAEVLGAS 136

Query: 125 AVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQEI 184
           AVI  +  SA  T  + K A GA E  P + + NLA T+ +LQ+ G  V+G  GEAEQ I
Sbjct: 137 AVIGTRHNSAPETGALAKTASGALERQPYLRMRNLADTIVELQRMGFLVLGLDGEAEQTI 196

Query: 185 YQQDLTG----PLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEA 240
            +  L G    P+ +++GAEG G+R+ T+E  D LVK+  AG   SLNVS A  + L+ +
Sbjct: 197 -EAVLDGRKGDPVALVLGAEGPGLRQKTKETVDHLVKIDAAGGFGSLNVSNAAAIALYAS 255

Query: 241 V 241
           +
Sbjct: 256 L 256