Pairwise Alignments

Query, 248 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Pseudomonas putida KT2440

Subject, 258 a.a., rRNA methylase from Dechlorosoma suillum PS

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 31/246 (12%)

Query: 9   GVHAVQALLQHHPKRVKQIWLSEG-RSEPRLETLLALAAENRVPVGQAERREMDAWVEGV 67
           G+H + A  +   K V+++++SE  R +P +   LA +A  +  V  +ER   D  +   
Sbjct: 35  GMHLLTAYEERFQK-VRELFVSEAARDKPEIAAYLAASAGIKQTV-LSERLFEDLGLVDT 92

Query: 68  HQGVVAEVS-PSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGATAV 126
             G+V  ++ P    G           +     ++LDGV DP NLG+ LR+A AAG   V
Sbjct: 93  PTGIVGLINTPVPAAGP----------DAQGDAVLLDGVQDPGNLGSILRSAAAAGFRQV 142

Query: 127 IVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEA------ 180
           ++  D +    P   +   GA          +    + + Q    ++ G  G+A      
Sbjct: 143 LLSADCAQAWAPKTLRAGQGA----------HFQTVIHENQDLCAFLAGYGGKAAVTCLG 192

Query: 181 -EQEIYQQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFE 239
            + +++  DL GP+  + G+EG+G+R       +  + +PM G   SLNV+ A  +CLFE
Sbjct: 193 AQGDLFDADLRGPVAWVFGSEGQGVRPAVLALTNAPLAIPMPGGSESLNVAAAAAICLFE 252

Query: 240 AVRQRQ 245
            VRQR+
Sbjct: 253 TVRQRR 258