Pairwise Alignments

Query, 248 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Pseudomonas putida KT2440

Subject, 253 a.a., rRNA methylase, putative, group 3 from Dechlorosoma suillum PS

 Score =  243 bits (621), Expect = 2e-69
 Identities = 125/240 (52%), Positives = 171/240 (71%), Gaps = 3/240 (1%)

Query: 7   IYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMDAWVEG 66
           I+G HAV A L+H+P  VK+++L + R + R + LL  A    + V  A+ + +D    G
Sbjct: 15  IHGFHAVIAKLRHNPDAVKEVYLDQSRKDARAKDLLRHAEAQGIRVIPADAKRLDGLAPG 74

Query: 67  V-HQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGATA 125
             HQGVVA+V  ++   ++ L+++L+  E PPL+L+LDGVTDPHNLGACLR ADA GA A
Sbjct: 75  QRHQGVVAKVDANE--RQVTLDDVLDTLEEPPLLLILDGVTDPHNLGACLRVADAVGAHA 132

Query: 126 VIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQEIY 185
           VI PKD+S  LT  V KVA GAAE +P + VTNLARTL +L++R +W++GTA +A+ ++Y
Sbjct: 133 VIAPKDRSVGLTNTVLKVASGAAETVPYITVTNLARTLRELKERDIWIIGTADQADGDLY 192

Query: 186 QQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEAVRQRQ 245
             +       ++GAEG+GMRRLTRE CD LV++PM GSV SLNVSVA+GVCL+EA R+ Q
Sbjct: 193 TAEWPKGTAWVLGAEGEGMRRLTRETCDQLVRIPMFGSVESLNVSVASGVCLYEARRRLQ 252