Pairwise Alignments

Query, 465 a.a., replicative DNA helicase (ATPase) from Pseudomonas putida KT2440

Subject, 468 a.a., replicative DNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  553 bits (1424), Expect = e-162
 Identities = 277/457 (60%), Positives = 359/457 (78%), Gaps = 6/457 (1%)

Query: 11  DLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAVHKLAD 70
           D Q  A+KVPPHS+EAEQ+V+GGL+LDN  W+ V + V   DFY   HRLIF  V  + +
Sbjct: 15  DAQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVSEHVMTQDFYSRPHRLIFDGVKSILE 74

Query: 71  ANQPFDVVTLHEQLDKEGLSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLIS 130
           A +P D++TL E L++      VGG AYLA+LAKNTPS ANI AYA I+ ERA +R LI 
Sbjct: 75  AGKPLDLITLSEYLEQREQLEDVGGFAYLADLAKNTPSAANINAYAEIVAERALVRNLIG 134

Query: 131 ISTDIADNAFNPQGRNAAEILDDAERQIFQIAEARPKTG-GPVGVNELLTMAIDRIDTLF 189
           ++ +IAD  ++PQGRNA ++LD AE ++F IAEAR     GP  V+ +L   ++RI+ L+
Sbjct: 135 VANEIADAGYDPQGRNAEDLLDLAESKVFAIAEARTSENEGPKNVDSILERTLERIELLY 194

Query: 190 NSDSD-ITGISTGYTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVENAVLRTDKAVL 248
            +  D +TG++TG+TDL++KT+GLQ +DLIIVA RPSMGKTTFAMNL ENA +  DK VL
Sbjct: 195 KTPQDGVTGVNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENAAMEQDKPVL 254

Query: 249 VFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNDRK-LFIDDTAG 307
           +FSLEMP E ++MRML+SL R+DQTK+R+GQLDD+DW R++S + +L ++K ++IDD++G
Sbjct: 255 IFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGILMEKKNMYIDDSSG 314

Query: 308 ISPSEMRARTRRLAREHGEIAMIMVDYLQLMQIPGSAGDNRTNEISEISRSLKALAKEFN 367
           ++P+E+R+R RR+AREHG +++IMVDYLQLM++P    DNRT EI+EISRSLKALAKE N
Sbjct: 315 LTPTEVRSRARRIAREHGGLSLIMVDYLQLMRVPALT-DNRTLEIAEISRSLKALAKELN 373

Query: 368 CPVIALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADVIMFVYRDEVYHPETEHKGVAEI 427
            PV+ALSQLNRSLEQR +KRPVNSDLRESG+IEQDAD+IMF+YRDEVYHP++  KG AEI
Sbjct: 374 VPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHPDSPLKGTAEI 433

Query: 428 IIGKQRNGPIGFVRLAFIGKYTRFENLAPGMYNFDDD 464
           IIGKQRNGPIG VRL F G Y+RF+N A     FDD+
Sbjct: 434 IIGKQRNGPIGSVRLTFQGHYSRFDNYAGPA--FDDE 468