Pairwise Alignments

Query, 465 a.a., replicative DNA helicase (ATPase) from Pseudomonas putida KT2440

Subject, 454 a.a., primary replicative DNA helicase from Synechococcus elongatus PCC 7942

 Score =  363 bits (932), Expect = e-105
 Identities = 196/437 (44%), Positives = 283/437 (64%), Gaps = 6/437 (1%)

Query: 20  PPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAVHKLADANQPFDVVT 79
           PP ++EAE+A+LG ++LD  A  R+ D +S   FY  +HR I+RA  +L    QP D+ +
Sbjct: 16  PPQNVEAEEAILGSILLDPEAIGRIADVLSPEAFYNSNHRDIYRAAVQLHSQGQPTDLTS 75

Query: 80  LHEQLDKEGLSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLISISTDIADNA 139
           L   L   G   +VGG + LA+L     + AN++ YA ++ ++   RQLI     +    
Sbjct: 76  LTTSLQDAGQLDKVGGQSRLAKLVDRVVTTANVEQYAQLVIDKFLRRQLIQAGNSVIQLG 135

Query: 140 FNPQGRNAAEILDDAERQIFQIAEARPKTGGPVGVNELLTMAIDRIDTLFNSDSDITGIS 199
           ++   +    +LD AE+++F I + RP T G +   E+LT     I++  +  + ++GIS
Sbjct: 136 YDTT-KPLEAVLDQAEQKVFGITQERP-TMGLLPAAEILTSTFAEIESR-SMGTALSGIS 192

Query: 200 TGYTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVENAVLRTDKAVLVFSLEMPGESL 259
             Y DLD  T G Q +DLIIVAGRP+MGKT+  +N+  N  +     V VFSLEM  E L
Sbjct: 193 CNYYDLDAMTQGFQRSDLIIVAGRPAMGKTSIVLNIARNITVAHKLPVCVFSLEMSKEQL 252

Query: 260 IMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRARTRR 319
           I R+LS    I+ +++RSG++ D +W  L   +  L+   +FIDDT G++ SEMR++ RR
Sbjct: 253 IYRLLSMEIGIESSRLRSGRIGDHEWEMLGKGIMQLSQLPVFIDDTPGLTVSEMRSKARR 312

Query: 320 LAREHG-EIAMIMVDYLQLMQIPGSAGDNRTNEISEISRSLKALAKEFNCPVIALSQLNR 378
           L  E G ++ +I++DYLQLM+  GS+ DNR  EIS+I+RSLK LA+E N PVIALSQL+R
Sbjct: 313 LMSEQGGQLGLILIDYLQLME--GSSSDNRVQEISKITRSLKGLARELNVPVIALSQLSR 370

Query: 379 SLEQRPNKRPVNSDLRESGAIEQDADVIMFVYRDEVYHPETEHKGVAEIIIGKQRNGPIG 438
            +E R NKRP+ SDLRESG+IEQDAD++M +YRDE Y+P+T  +G+ EII+ K RNGP+G
Sbjct: 371 GVESRTNKRPMMSDLRESGSIEQDADLVMMIYRDEYYNPDTPDRGITEIIVAKHRNGPVG 430

Query: 439 FVRLAFIGKYTRFENLA 455
            V+L F  ++TRF NLA
Sbjct: 431 TVKLLFEPQFTRFRNLA 447