Pairwise Alignments

Query, 784 a.a., putative enzyme of unknown function from Pseudomonas putida KT2440

Subject, 789 a.a., YgiQ family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

 Score =  989 bits (2558), Expect = 0.0
 Identities = 506/785 (64%), Positives = 588/785 (74%), Gaps = 50/785 (6%)

Query: 24  PLYDYPKYWAECFGPAPFLPMSREEMDLLGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLE 83
           P++ Y KYWAECFG APFLP SREEMD LGWDSCD+IIVTGDAYVDHPSFGMAIIGRLLE
Sbjct: 7   PIHHYKKYWAECFGTAPFLPTSREEMDQLGWDSCDVIIVTGDAYVDHPSFGMAIIGRLLE 66

Query: 84  AQGFRVGIIAQPNWQSKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDDAYTPGG 143
           AQGFRVGIIAQP WQ+KD FM LG+PNLFFGV AGNMDSMINRYTADKKIR DDAYTP  
Sbjct: 67  AQGFRVGIIAQPEWQTKDAFMTLGKPNLFFGVTAGNMDSMINRYTADKKIRHDDAYTPNN 126

Query: 144 LAGSRPDRASLVYSQRCKEAYKHVPIVLGGIEASLRRIAHYDYWQDKVRHSILIDASADI 203
             G RPDR SLVYSQRC+EAYK VPIVLGGIEASLRR+AHYDYW DKVR SIL+DA ADI
Sbjct: 127 KGGMRPDRCSLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSILLDAKADI 186

Query: 204 LLFGNAERAVVEVAQRLSNGEKIETITDVRGTAFVRRDTPQGWYEIDSTRIDRPGRVDKI 263
           LLFGNAERA+VEVA RL+NGE I  + D+RGTA      P+ +  IDSTRID+P +    
Sbjct: 187 LLFGNAERALVEVAHRLANGESINKMVDIRGTAVNLAQVPEHFKIIDSTRIDQPNKPFVP 246

Query: 264 INPY-VNTQDTQACAIEQAKGDQEDPNEAKVVQILDSPAVTREKSVIRLPSFEKVRNDPV 322
            NPY V TQ    CA    KGD+++  EA+ + I  S    +  +V RLPSFEK+ ND +
Sbjct: 247 SNPYEVETQ----CA---TKGDEKE--EAQPITIRPSRHDAKTTAV-RLPSFEKLVNDRI 296

Query: 323 LYAHANRVLHLETNPGNARALVQKHGEVDVWFNPPPIPMSTEEMDYVFGMPYARVPHPAY 382
           LYAHA+RVLHLETNP + RALVQ+HG+ ++W N  PIP++TEEMD+VFG+ YARVPHP Y
Sbjct: 297 LYAHASRVLHLETNPYSGRALVQRHGDRELWVNQAPIPLTTEEMDFVFGLYYARVPHPKY 356

Query: 383 GKERIPAYEMIRFSVNIMRGCFGGCTFCSITEHEGRIIQNRSHESILHEIEEMRDKVPGF 442
           G  +IPAY+MI+ SVNIMRGCFGGC+FCSITEHEGRIIQNRS ESI++E++E+RDKVPGF
Sbjct: 357 GDAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESIINELKEIRDKVPGF 416

Query: 443 TGVVSDLGGPTANMYRIACKSPEIEKYCRKPSCVFPGICENLNTDHSSLIELYRKARALP 502
           TGV+SDLGGPTANMYR+ C  P+ E  CR+PSCVFPGIC  LNTDH   I+LYR AR + 
Sbjct: 417 TGVISDLGGPTANMYRLGCSDPKAEANCRRPSCVFPGICHKLNTDHKHTIDLYRAARDVD 476

Query: 503 GVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTERGPLDKMMKPGIGTYDR 562
           G+KK++IASG+RYDLA+ESPEYV+ELVTHHVGGYLKIAPEHTE+GPL  MMKPG+GTYDR
Sbjct: 477 GIKKVVIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLSMMMKPGMGTYDR 536

Query: 563 FKRMFEKFSKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYPSPMA 622
           FK +FEK+S EAGK+QYLIPYFIAAHPGT DEDM+NLALWLK N +R DQVQ FYPSPM 
Sbjct: 537 FKELFEKYSAEAGKKQYLIPYFIAAHPGTEDEDMVNLALWLKSNNYRCDQVQNFYPSPMC 596

Query: 623 SATAMYHSGKNPLRKVTYKS-EGVEIVKSDEQRRLHKAFLRYHDPKGWPMLREALQRMGR 681
           +ATAMYH+  NPL++V YK  E V + K + QRRLHKA LRYHDP  WPM+REAL  MG+
Sbjct: 597 NATAMYHAEVNPLKRVKYKKPEKVPVAKGEAQRRLHKALLRYHDPANWPMIREALIAMGK 656

Query: 682 ADLIGPGKHQLIPLHQPQTDTYQSARRKNSTPAGSHKVGKD--QKILTQHT--------- 730
             LIG     LIP  +  +D          TPA S K G+    +  T+HT         
Sbjct: 657 RHLIGDRPECLIP--EKDSDLV--------TPAQSRKSGRHGANRFATKHTHSQPGFDAL 706

Query: 731 --------GLPPRGSD-------GSKPWDKREKAKAEAFARNQQAAKERKEASKGGKGNK 775
                   G P  G+        GSKP     K  A   A NQ A  E+    +G +G+ 
Sbjct: 707 RGNKSGGQGRPNSGNKSNQGKPAGSKP--TGSKPTANKPAGNQSARSEQNRGQQGQRGSA 764

Query: 776 KPRQP 780
              +P
Sbjct: 765 TGGKP 769