Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  301 bits (770), Expect = 2e-86
 Identities = 151/302 (50%), Positives = 216/302 (71%), Gaps = 7/302 (2%)

Query: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVE 64
           F+QQLVNGLTLGS+YG+IAIGYTMVYGIIGMINFAHG+++M+  + A I   LL  F + 
Sbjct: 4   FVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTF-IA 62

Query: 65  SFPLLMLGTLLFTI--VVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQIS 122
             P+++   ++  +  +   ++ +TIER+AY+PLR S RLAPLI+AIG+S++L N+ Q++
Sbjct: 63  GVPVVLALLIMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQVT 122

Query: 123 QGARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRA 182
           QG R + +P L+     +      + ++  +I I+V   + + +  Y++  T LGR  RA
Sbjct: 123 QGPRNKPIPPLVSSVYDLFG----ISVSLKQIIIVVITAILLSVFWYIVNRTPLGRAQRA 178

Query: 183 TQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAA 242
           T+QDRKMA++LG++ DR IS  F++GA +AA+AG +  M YG   F  GF  G+KAFTAA
Sbjct: 179 TEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDGFAPGVKAFTAA 238

Query: 243 VLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLVA 302
           VLGGIGSLPGA+LGG+++G+ ESL+S     DYKDV +FS+L ++LIF+P G+LGRP V 
Sbjct: 239 VLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFSILAIVLIFKPSGILGRPEVE 298

Query: 303 KV 304
           KV
Sbjct: 299 KV 300