Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 291 a.a., putative high-affinity branched-chain amino acid transport system permease protein LivH from Phaeobacter inhibens DSM 17395

 Score =  139 bits (349), Expect = 1e-37
 Identities = 96/305 (31%), Positives = 157/305 (51%), Gaps = 15/305 (4%)

Query: 1   MDGIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAY 60
           MDG+  Q LV+GL  G VYGLIA+G+ ++Y     +NFA G+  M+ A++  + L    Y
Sbjct: 1   MDGV--QLLVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVT-LGLTNAEY 57

Query: 61  FGVESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQ 120
             +   P  +   L  +I +    G+ ++ +  + L    + A +I  I +  +++ +A 
Sbjct: 58  LHL---PFWLAAPL--SIAIMAGLGYLLDLVILRHLFGQNQTAVVILTIALGFVIRFFA- 111

Query: 121 ISQGARQQGVPTLLEGAMRV-EVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRM 179
              GA     P  LE  + + +V    V L    + I++   +    L    + TKLG  
Sbjct: 112 ---GAIWGHEPQTLESPLALGDVQLAGVVLGLADLAIIIVTVLLTWSLYQFFQRTKLGLA 168

Query: 180 CRATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAF 239
            +A  Q++  A  +GI   RV   ++ +    AA+AG+L     G  D  AG ++GIKAF
Sbjct: 169 MQAASQNQMAAYFMGIPVKRVQGLIWGLSGATAAVAGILFASK-GAIDPNAG-LLGIKAF 226

Query: 240 TAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRP 299
            AAV+GG GSLPGA+ GG+I+G+ E   +  + + Y  +  + LL+ +L+FRP GL  + 
Sbjct: 227 AAAVIGGFGSLPGALAGGLIVGVIEPFAARYLAAGYSQIAPYVLLLAVLVFRPHGLFSQV 286

Query: 300 LVAKV 304
              KV
Sbjct: 287 RTKKV 291