Pairwise Alignments

Query, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

Subject, 307 a.a., branched-chain amino acid ABC-type transport system, permease component from Dechlorosoma suillum PS

 Score =  275 bits (703), Expect = 1e-78
 Identities = 148/308 (48%), Positives = 209/308 (67%), Gaps = 12/308 (3%)

Query: 4   IFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGV 63
           IFLQQ++NGL LGS+Y L+A+GYTMVYGI+G+INFAHGEV MI A  A   + LLA  G+
Sbjct: 3   IFLQQIINGLVLGSIYALVALGYTMVYGILGLINFAHGEVVMIGALTALTVVKLLAGSGL 62

Query: 64  ESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQ 123
              P++ L  L+    V    G+ IE+IAY+PLR + RLAPLI+AIG+S++LQN A +  
Sbjct: 63  PG-PVIALIGLMAAAPVCMAIGYGIEKIAYRPLRKAPRLAPLITAIGVSIVLQNLAMMVW 121

Query: 124 GARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRAT 183
           G      P +L       +G+ F  L    I +LVAA +  GLL  +I  T+LGR  RAT
Sbjct: 122 GRSYHSFPAVLPAEAHEVLGATFTDLQV--IIVLVAAGMMAGLLL-LINRTRLGRAMRAT 178

Query: 184 QQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAV 243
            ++  +A ++G+N + +IS  FVIG+ +AA+AG++++ NY    +Y GFI+G+KAFTAAV
Sbjct: 179 AENPAIAQLMGVNVNHIISLTFVIGSALAAVAGLMVSANYSIAHYYMGFILGLKAFTAAV 238

Query: 244 LGGIGSLPGAMLGGIILGISESLFSGLI--------NSDYKDVFSFSLLVMILIFRPQGL 295
           LGGIG+L GAM+GGI+LG+ ESL +G I         S Y+DVF+F +L+++L+FRP GL
Sbjct: 239 LGGIGNLAGAMIGGILLGLIESLGAGYIGDITGGFLGSHYQDVFAFFVLILVLVFRPSGL 298

Query: 296 LGRPLVAK 303
           +G  +  +
Sbjct: 299 VGEKVAER 306