Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 461 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  318 bits (816), Expect = 2e-91
 Identities = 198/449 (44%), Positives = 260/449 (57%), Gaps = 46/449 (10%)

Query: 5   VAKTASISETKGFDLK-RSLLETIVAGLLALIVFGPVVGVVLDGYTFNAEPRRVAW---- 59
           +A  AS + + G +L  R+L E + AGL+ L +F   VG+  D    N       W    
Sbjct: 1   MANVASTTASAGSELTARALREAVFAGLITLGMFVLFVGLKTDQNIRNELILTQRWGLLA 60

Query: 60  -LVGGVMVGRFLLSLFLQTAPGQRMLLGFDSGGSGVHVTAPDYK----------SRLRYI 108
             V   MVGRFL+  ++Q    QR               APD            S++  I
Sbjct: 61  TFVAIAMVGRFLMVAYVQPRLAQR---------KAAKAAAPDVVKEETFFSRNWSKIAVI 111

Query: 109 IPAL---IVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIG 165
           +  +   +++A+V    + K++    I  LIYV+L  GLNIVVGLAGLLDLGYVAFYA+G
Sbjct: 112 LLLIYPPVIVALVGVQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVG 171

Query: 166 AYGLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVL 225
           AY  AL   Y GL FW +LP+A + AA  G +LGFPVLR+ GDYLAIVTL FGEIIRLVL
Sbjct: 172 AYSYALLSSYFGLSFWVLLPIAGLLAACWGVVLGFPVLRLRGDYLAIVTLAFGEIIRLVL 231

Query: 226 NNWLSFTGGPNGMPA-PSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFM 284
            NW   T G  G+      T FG++F    KDG        G   +++   +F++ ++  
Sbjct: 232 INWTEVTKGTFGVSGIAKATLFGIKFD-ATKDG---FAAMMGLPMSSAYYKIFLFYLILG 287

Query: 285 VVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFF 344
           + L   ++  RL RMP+GRAWEALREDEIACRS+G+N V  KL+AF  GA   G AG FF
Sbjct: 288 LALLTAFVTIRLRRMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGFAGSFF 347

Query: 345 ATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFS------- 397
           A  QGFV+P SF F ESA+ILAIVVLGGMGS  G+ IAA V+    E+LR  +       
Sbjct: 348 AVRQGFVSPESFVFLESAVILAIVVLGGMGSLTGIAIAAVVMIGGTEILRELTFLKMIFG 407

Query: 398 ------EYRVLLFGVLMVLMMIWRPRGLI 420
                  YR+L+FG+ MV++M+W+PRG +
Sbjct: 408 PTFTPELYRMLIFGLAMVVVMVWKPRGFV 436