Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  134 bits (338), Expect = 3e-36
 Identities = 98/344 (28%), Positives = 165/344 (47%), Gaps = 37/344 (10%)

Query: 97  TAPDYKSRLRYIIPALIVIAIVFPIFANKYLLTVVILG-LIYVLLGLGLNIVVGLAGLLD 155
           T P    R+RY +   + + I+ P   N Y  + V++  LI+ +  +GLNI+ G  G + 
Sbjct: 19  TFPIAFDRMRYYLVLAVAVGII-PFVINDYWASAVMVPFLIWAIAAIGLNILTGYCGQVS 77

Query: 156 LGYVAFYAIGAYGL-ALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVT 214
           LG   F A+GAY    L   +  L     + L  +  A  G + G P LR+ G YLA+ T
Sbjct: 78  LGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYLAVAT 137

Query: 215 LGFGEIIRLVLNN--WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNAS 272
           L     +  + N   W         + AP  T FG              +   G   +A+
Sbjct: 138 LAAQFFLVWLFNKVPWFYNYSASGQINAPERTMFG--------------YAITGPNADAA 183

Query: 273 LKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTL 332
            K++F  A LF++     ++   LTR  +GR+W A+R+ +IA   +G+N +  KL+AF +
Sbjct: 184 PKYLFCLAFLFVLA----WLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAV 239

Query: 333 GASTAGLAG-VFFATYQGFVN-PSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAP 390
            +   G+AG +FF+ Y G V    +F   +S L+L ++++GG+GS  G +  A  + + P
Sbjct: 240 SSFFVGVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLP 299

Query: 391 ELLRSF------------SEYRVLLFGVLMVLMMIWRPRGLIRI 422
            LL++             + +  ++ G L++  +I  P GL R+
Sbjct: 300 VLLKNVMVGSLGWDTAIAAHFEFVVLGGLIIFFLIVEPHGLARL 343