Pairwise Alignments

Query, 211 a.a., Transcriptional regulator, TetR family from Pseudomonas putida KT2440

Subject, 205 a.a., DNA-binding transcriptional repressor FabR from Marinobacter adhaerens HP15

 Score =  117 bits (293), Expect = 2e-31
 Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 4/202 (1%)

Query: 1   MLPRAEQKLQTRQALLDAACLLMESGRGFGSISLREVAKTAGIVPTGFYRHFSDMDALGL 60
           M  RAEQK +TR+AL+DAA   + + RGFGS+SLREVA+ AGI PT FYRHF+++D LGL
Sbjct: 1   MATRAEQKQKTRRALMDAALSQLSADRGFGSLSLREVAREAGIAPTSFYRHFAELDELGL 60

Query: 61  ALVAEIDTTFRQTIRLVRQNEFELGG-ITDASVRIFLDVVAAHRAQFLFLAREQYGGAQA 119
           ALV E     RQ +R  R+     GG     SV  F++ +  +   F  + RE+ G ++ 
Sbjct: 61  ALVDEGGVALRQLMRQARKRIARDGGSAISTSVETFMEYLGNNANLFRLMLRERTGVSKP 120

Query: 120 VRQAIARLRQDISDDLATDLARMKRWQHLDSAALAVMADLVVKTVFATLPELIDNPEAGY 179
            R A+         +LA DL R+   Q+   +   ++A+ +V  VF    E +D   +  
Sbjct: 121 FRTAVKAEIDHFVTELADDLRRIADEQNKPLSEARLVAEAMVTLVFNQGAEALDATASER 180

Query: 180 PQALTPQEKITQQLRFIFVGAR 201
            +    + K+  +LR I VG++
Sbjct: 181 DEL---KAKLKTELRMILVGSQ 199