Pairwise Alignments

Query, 211 a.a., Transcriptional regulator, TetR family from Pseudomonas putida KT2440

Subject, 202 a.a., transcriptional regulator (TetR/AcrR family) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 42.4 bits (98), Expect = 6e-09
 Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 16/158 (10%)

Query: 25  SGRGFGSISLREVAKTAGIVPTGFYRHFSDMDALGLALVAEIDTTFRQTIRLVRQNEFEL 84
           S +G+   S+RE+A   GI  +  Y +F++ D +   ++  +       I     N+  +
Sbjct: 21  SEKGYKDASMREIASRTGITVSNIYHYFTNKDEIFRTILKPVLNDLYAKIYSHDANQMSI 80

Query: 85  GGITDA-----SVRIFLDVVAAHRAQFLFLAREQYGGAQAVRQAIARLRQDISDDLATDL 139
              T++     SV+ ++D+V+ HRA+   L        QA   ++   R + +D +   +
Sbjct: 81  EVFTNSDYQQESVQEYIDLVSEHRARLRMLL------FQAQGSSLENFRSEYTDAMTRTI 134

Query: 140 -----ARMKRWQHLDSAALAVMADLVVKTVFATLPELI 172
                   +++ HL+         L    +FA L EL+
Sbjct: 135 FVFFQGMKQKYPHLNIGITDFFIHLNTVWLFALLEELV 172