Pairwise Alignments

Query, 293 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 330 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 92.8 bits (229), Expect = 9e-24
 Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 24/284 (8%)

Query: 9   AILIWAGNTVVTKMSAGAIHPAEIGFYRWLLAALLFTPFLLPAVWRNRA---AIRPHLAK 65
           A  +W G     +++   + P  +   R+LLA    T  LL  +W+        R     
Sbjct: 27  ATALWGGTFTAGRIAVQQLSPLAVACGRYLLA----TTVLLLILWQREGWPPLNRRQQLL 82

Query: 66  VFVLGVLGMAMYQSLAYFAAGITSATNMGIILSLMPLMSLALSIAWLGQRLSYGALLGAV 125
           +F LGV G+A+Y  L +    +  A+   +I++L P      +  W G RL      G  
Sbjct: 83  LFGLGVSGIALYNWLFFIGLSLIPASRAALIIALNPTAIALGAAIWTGDRLRSWQWAGVG 142

Query: 126 VSFFGVLEVVSAGHPASLLQQGLNSGDLLMLVATLAYALYSFLLKKWQLRLPPMQLLYLQ 185
           +S  G + ++ +    +L   G   GDL ++   L + +YS L ++    L P+ +    
Sbjct: 143 LSLIGAILLLGSRQAGALTLPGW--GDLALVGCVLCWTVYSLLARQALRSLSPLTVTTGA 200

Query: 186 VLVAIVVLLPLFL---------LSDKTGLNSHNIGLVLYACVLASMIAPLVWMQAVHRLG 236
                V+L+ L+L         +S  TG     +GL        + +A  ++   + RLG
Sbjct: 201 CCWGSVLLIGLWLGQGAQLPVNVSFSTGSAIAFLGLG------GTALAFCLYANGIERLG 254

Query: 237 PSRTTLFFNLLPLVTALIAAVVLDEQLASYHLVGGLLTLAGVVL 280
            +R  LF NL+P+  + I A++L E L+   L+GGLL LAGV L
Sbjct: 255 AARAGLFINLVPVFGSAIGALLLQEPLSGLTLLGGLLVLAGVGL 298