Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  161 bits (408), Expect = 1e-44
 Identities = 94/238 (39%), Positives = 126/238 (52%), Gaps = 2/238 (0%)

Query: 21  RHDEFVADTHSAVHQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVWVPPDTEHGCYNPQ 80
           R  E+   T    H H W QL Y   GV  ++     ++ PP  AVWVP    H     +
Sbjct: 10  RTSEWPTGTVIVPHSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHCVRAAR 69

Query: 81  AIVYRSIY--LDRSLCAALPPHPCSLMISDILKAILGDFARRNLKVAEDERDQRLVQVLL 138
               RS+Y  ++ +  A LP     + +S + + ++ +F RR     ED  D RLV+VLL
Sbjct: 70  GGQNRSVYVTIEAAQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRLVRVLL 129

Query: 139 DQLLLAPTLACYLPFAHSDGLRQVLDALSAEPGDNRPLADWAARVHVSERTLARQFLREL 198
           DQ+   P    +LP+        V  AL A+P D RPL +WA     S RTLAR F  + 
Sbjct: 130 DQIAALPAQPLHLPWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLARTFRADC 189

Query: 199 GISFGEWRLRLRFLRAIEALEAGLPIQAIAFDLGYSSASAFIAMFQRQARCTPEQYRR 256
           G++FG+WRLRLR L A+E L AG  + A+AFD+GY   SAFIAMF+R    TP  Y R
Sbjct: 190 GLTFGQWRLRLRLLGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGAYFR 247