Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 278 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  145 bits (365), Expect = 1e-39
 Identities = 82/222 (36%), Positives = 122/222 (54%), Gaps = 3/222 (1%)

Query: 34  HQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVWVPPDTEHGCYNPQAIVYRSIYLDRSL 93
           H+H  GQL    HG +    A   ++ PP  AVW+P    H   N      R  YL    
Sbjct: 45  HRHRQGQLIMALHGAVTCTAANGLWIVPPGSAVWIPGGVSHS--NQVTANARLSYLFVEP 102

Query: 94  CAALPPHPC-SLMISDILKAILGDFARRNLKVAEDERDQRLVQVLLDQLLLAPTLACYLP 152
            AAL P  C +L +S +L+ ++   A  +      +   RLV+V+LD+L L PT    LP
Sbjct: 103 EAALLPQDCCTLSVSPMLREMILRLADASGHDEPKDHRGRLVRVMLDELALMPTGGLKLP 162

Query: 153 FAHSDGLRQVLDALSAEPGDNRPLADWAARVHVSERTLARQFLRELGISFGEWRLRLRFL 212
            +H   +  +  AL+A+PGD R L +WA+ V +SER+L R  ++E G+SFG WR +L  +
Sbjct: 163 VSHHPKIAMIASALAAQPGDRRTLMEWASHVAMSERSLKRLMIQETGLSFGRWRRQLHLI 222

Query: 213 RAIEALEAGLPIQAIAFDLGYSSASAFIAMFQRQARCTPEQY 254
            A+  L +G  +Q+++  LGY SA+AFI MF++    TP +Y
Sbjct: 223 VALRELASGASVQSVSLSLGYESATAFIVMFKKALGTTPARY 264