Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 264 a.a., transcriptional regulator, AraC family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  140 bits (353), Expect = 3e-38
 Identities = 83/251 (33%), Positives = 125/251 (49%), Gaps = 4/251 (1%)

Query: 8   IPQFTQLPAPVYFRHDEFVADTHSAVHQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVW 67
           IP    LP PV+ R +   A + +  H H W Q +Y   GV+++       ++PP  A+W
Sbjct: 7   IPDIAALPRPVFARAESLSAGSWTHPHSHDWVQFSYAVRGVLEIRTRQGSHMAPPQRAIW 66

Query: 68  VPPDTEHGCYNPQAIVYRSIYLDRSLCAAL---PPHPCSLM-ISDILKAILGDFARRNLK 123
           +P    H          RS+Y+D +  A L    P  C ++ ++ + + ++  F R    
Sbjct: 67  IPAGLPHEVMTSGPAEQRSLYIDPAALAPLWGTAPARCRVVEVTPLARELVLAFTRLPRD 126

Query: 124 VAEDERDQRLVQVLLDQLLLAPTLACYLPFAHSDGLRQVLDALSAEPGDNRPLADWAARV 183
             E     RLV VLLD+L+  P     LP      L  + +A+   PG++  L   AAR 
Sbjct: 127 YDEHGAPGRLVGVLLDELVALPEAGLSLPLPADARLAALCEAMLDAPGEDHSLPRLAARA 186

Query: 184 HVSERTLARQFLRELGISFGEWRLRLRFLRAIEALEAGLPIQAIAFDLGYSSASAFIAMF 243
            +S+RTL R F  E G+S  EWR R R L A+  LE G  + A+A ++GY S SAFIA F
Sbjct: 187 GMSDRTLTRLFRAETGLSLREWRQRARMLAALPELERGHGVTAVALEMGYDSTSAFIAAF 246

Query: 244 QRQARCTPEQY 254
           ++    TP ++
Sbjct: 247 RQLMGRTPGEF 257