Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 376 a.a., Heat shock protein DnaJ from Synechococcus elongatus PCC 7942

 Score =  154 bits (390), Expect = 2e-42
 Identities = 126/366 (34%), Positives = 167/366 (45%), Gaps = 81/366 (22%)

Query: 5   DYYKILGVEPTADEKAIKAAYRKLARKYHPDVSKERDAEEKFKEANEAYEVLGDAQKRAE 64
           DYY++LGV   AD+  IK AYR+LARKYHPDV+KE  AE+KFKE N AYEVL + + RA 
Sbjct: 4   DYYQLLGVARDADKDEIKRAYRRLARKYHPDVNKEPGAEDKFKEINRAYEVLSEPETRAR 63

Query: 65  FDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGGARQQQ 124
           +D+     G+ G       G++  G  GGF     +D F + F G       FGG   QQ
Sbjct: 64  YDQF----GEAGVSGAGAAGFQDFGDMGGF-----ADIFETFFSG-------FGGMGGQQ 107

Query: 125 RSAGRR----GQDVEL---------------ELAVFLEETLS--KESKQISFQVPQT--- 160
            SA RR    G+D+ L               E+ V  EET    + S   +   PQT   
Sbjct: 108 ASARRRGPTRGEDLRLDLKLDFRDAIFGGEKEIRVTHEETCGTCQGSGAKAGTRPQTCTT 167

Query: 161 -NAMGQ-----RTGFTT---------------------------------KTLNVRIPAG 181
               GQ     RT F +                                 K L + IPAG
Sbjct: 168 CGGAGQVRRATRTPFGSFTQVSVCPTCEGSGQMIVDKCDDCGGAGRLRRPKKLKINIPAG 227

Query: 182 VTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGAK 241
           V  G R+R+  +G  G  GG  GDL++ + ++    F  EG +L  TV ++  +A LG  
Sbjct: 228 VDSGTRLRVANEGDAGLRGGPPGDLYVYLFVSEDTQFRREGINLFSTVTISYLQAILGCS 287

Query: 242 VAVPTLDGKINLTIRPDSQSGQRLRVPGKGL--ANKQGERGNLYAQLKVVMPPASDESAR 299
           + V T+DG   L I P +Q    L V GKG+        RGNL   +KV +P       R
Sbjct: 288 LEVATVDGPTELIIPPGTQPNAVLTVEGKGVPRLGNPVARGNLLVTIKVEIPTKISAEER 347

Query: 300 ELWTKL 305
           EL  K+
Sbjct: 348 ELLEKV 353