Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 326 a.a., Heat shock protein DnaJ-like from Synechococcus elongatus PCC 7942

 Score =  197 bits (500), Expect = 4e-55
 Identities = 122/334 (36%), Positives = 180/334 (53%), Gaps = 39/334 (11%)

Query: 2   DFKDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK-ERDAEEKFKEANEAYEVLGDAQ 60
           DFKDYY  LGV   A    IK A+RKLAR+YHPD++  ++ AE +FKE NEAYEVL D  
Sbjct: 5   DFKDYYATLGVGRAASADEIKKAFRKLARQYHPDMNPGDKVAEARFKEINEAYEVLSDTD 64

Query: 61  KRAEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEG------GDFSDFFSSI---FGG-- 109
           KR ++D+  +Y  + G P   P      G G GFE       G F DF + +   FGG  
Sbjct: 65  KRRKYDQFGQYWSRVGGPTGGP------GPGVGFEDFEFGRYGSFDDFINELLGRFGGGA 118

Query: 110 --------RSAGGNPFGGARQQQRSAGRRGQDVELELAVFLEETLSKESKQISFQVPQTN 161
                   RS G   F G    Q +AG R  +++ E ++ L  + +    Q   ++    
Sbjct: 119 TASASAGYRSPGFQDFAGGFGSQATAGARAVNLDAEASISLSLSDAFRGTQKQLRI---- 174

Query: 162 AMGQRTGFTTKTLNVRIPAGVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVE 221
                    ++ + V++PAG+  G ++RL+G+G      G  GDL+L I + PH  F +E
Sbjct: 175 --------NSEMVEVKVPAGIKAGSKLRLRGKGNIMPNTGKRGDLYLKIEVKPHEFFQLE 226

Query: 222 GHDLIITVPLAPWEAALGAKVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLANKQGERGN 281
           G  L   VP+AP EAALGA +AVPT DG +N+TI    ++GQ LR+ GKG   + G RG+
Sbjct: 227 GDQLSCEVPIAPDEAALGATIAVPTPDGLVNVTIPAGVRTGQSLRLRGKGWPTRTG-RGD 285

Query: 282 LYAQLKVVMPPASDESARELWTKLSEKAAFNPRT 315
           L  ++ + +P +  E+ R+ + +L    + + R+
Sbjct: 286 LLVKVAIAVPKSLTEAERQAYEQLQRSRSTDLRS 319