Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 379 a.a., chaperone protein DnaJ from Sinorhizobium meliloti 1021

 Score =  179 bits (454), Expect = 9e-50
 Identities = 128/360 (35%), Positives = 177/360 (49%), Gaps = 77/360 (21%)

Query: 4   KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK-ERDAEEKFKEANEAYEVLGDAQKR 62
           +D Y+ LGV+  ADEK +K+A+RKLA KYHPD +  ++++E+ FKE NEAYE L D QKR
Sbjct: 3   RDLYETLGVQKNADEKELKSAFRKLAMKYHPDRNPGDQESEKSFKEINEAYETLKDPQKR 62

Query: 63  AEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGG---DFSDFFSSIFGGRSAGGNPFGG 119
           A +D   +YG  H    Q   G    G G GF GG    FSD F  IFG          G
Sbjct: 63  AAYD---RYG--HAAFEQ---GGMGAGFGNGFAGGGAHGFSDIFEDIFG-------EMMG 107

Query: 120 ARQQQRSAGR-RGQDVELELAVFLEETLSKESKQISFQV-----------------PQTN 161
            RQ++ S GR RG D+   + + LEE  S ++ QI                     P+T 
Sbjct: 108 GRQRRSSGGRERGADLRYNMEISLEEAYSGKTAQIRVPTSITCDVCTGTGAKPGTSPKTC 167

Query: 162 AMGQRTG--------------------------------------FTTKTLNVRIPAGVT 183
              Q TG                                         +TL+V IPAG+ 
Sbjct: 168 GTCQGTGRVRAAQGFFSIERTCPTCGGRGQTIADPCTKCHGQGRVVEERTLSVNIPAGIE 227

Query: 184 DGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGAKVA 243
           DG RIRL G+G  G  GG  GDL++ + + PH  +  +G DL   VP++   AALG K  
Sbjct: 228 DGTRIRLSGEGEAGLRGGPAGDLYIFLSVKPHEFYQRDGADLYCAVPISMTTAALGGKFD 287

Query: 244 VPTLDG-KINLTIRPDSQSGQRLRVPGKGL-ANKQGERGNLYAQLKVVMPPASDESAREL 301
           V TLDG K  +T+   +Q+G++ R+ GKG+   +  + G+LY Q+++  P    +  REL
Sbjct: 288 VTTLDGTKSRVTVPEGTQAGKQFRLKGKGMPVLRSSQTGDLYIQIQIETPQKLTKRQREL 347