Pairwise Alignments

Query, 359 a.a., putative Urea ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 314 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  133 bits (334), Expect = 7e-36
 Identities = 96/297 (32%), Positives = 148/297 (49%), Gaps = 30/297 (10%)

Query: 56  KILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAGDGLPGFMTFLSWT 115
           K+LC+A+ A A +L+ GY GLLS GH  FF                     GF  ++S  
Sbjct: 31  KVLCFALFACAFNLLLGYVGLLSFGHAAFF---------------------GFAAYVSAH 69

Query: 116 ELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKGVYFSIMTQALTFAGMLLFF 175
            L  +  G      A+ L  L  G+L L FGW A R +  G+YF+++T AL  A M+ F 
Sbjct: 70  ALKVWELGPLQ---AVALGTLTAGVLGLGFGWLAIRRQ--GIYFAMVTLAL--AQMIYFL 122

Query: 176 RNETGFG-GNNGFTSFRTILGFDIAAQGTRAVLFLLTVALLLASLYLCWRLTRSKFGRLL 234
             +  F  G +G  +      F +        L+ L +AL +    +  R   S FG++L
Sbjct: 123 CLQAAFTHGEDGIQAVPRPPVFGLIDVSDPGRLYWLVLALTVLGFLVIARAIHSPFGQVL 182

Query: 235 TAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINPSEMSPTNSIEAA 294
           TA+R+ E R +  GYD   +KL+ +VLSA L G AGA+ V    + + +++    S E  
Sbjct: 183 TAIRENEPRAISLGYDVDRYKLVAFVLSAALAGFAGAIKVMVFQLASLTDVHWHMSGEVV 242

Query: 295 VWVALGGRGTLIGPLLGAGLVNGMKSWFTVAFPEFWLFFLGALFILVTLYLPKGVVG 351
           +   +GG GTL GPL+GA +V G+++ F  +F  +     G +F+   L   +G++G
Sbjct: 243 LMTLIGGVGTLAGPLVGAAVVVGIQNVF-ASFGAWVTIIQGVIFVACVLLFRRGIMG 298