Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 377 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 23/263 (8%)

Query: 17  AAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKGGVNGKMLEPVV 76
           A +  S   Q    IK+G    LSG +A   +  +D A   ++ IN+KGG++G+ +E V 
Sbjct: 17  ALLATSLHAQQGNVIKLGQSLPLSGPLAELGSEYRDGAQAYLKWINSKGGIHGRRIELVT 76

Query: 77  VDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEG--- 133
           +D         E ++QLL ++ V    G + S +  +++P+  E       P  Y G   
Sbjct: 77  LDDGYVVEKSVENAKQLLDKEGVFAFLGMFGSANYTALMPLVNERGVPSVAP--YTGADE 134

Query: 134 --EEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFF---------LLGTDYVYPRTT 182
             E+ SP  F+  A+   +    V+ L +        F+         L G +    +  
Sbjct: 135 LREQASPQTFWLRASYGDETEKIVDQLTTLGINHIAVFYQNDAFGKAGLKGVEVALKKRN 194

Query: 183 NKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAV-ISTVNGDSNVP 241
            K++ +    K     D+ E       AD Q +V      S    TA+ +  +      P
Sbjct: 195 LKVIASGSFDK--VKNDVTEAVKAIAAADTQAVV----MISTYKPTALFVKQMRATGKQP 248

Query: 242 FYKELANQGLKATDVPVVAFSVG 264
            +  L+  G KA    + A + G
Sbjct: 249 QFFALSVVGYKALQAEMGAEAAG 271