Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 372 a.a., high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 73.9 bits (180), Expect = 7e-18
 Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 14/228 (6%)

Query: 3   RRSLIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQIN 62
           R+   KAL    ++A M  +  + A +TIK+G+  + SG +A       + A +  +  N
Sbjct: 2   RKGWFKALIAGMTVAVM--AGPVFAGDTIKLGVPGAHSGDLASYGLPSANAAKIVAKMFN 59

Query: 63  AKGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELN 122
            KGG+NGKM+E +  D     P  A  +   L  D V +V G   S + K+ LP+++E N
Sbjct: 60  DKGGINGKMVEVIPQDDQCK-PEMATNAATKLVSDGVDIVLGHICSGATKAALPIYKEAN 118

Query: 123 GLLFYP------VQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDY 176
            ++  P      +   G+   P  F T ++ +QQA   V++ + + G  AK+  +L    
Sbjct: 119 KVVMSPSATTPALTQSGD--YPMFFRTISSDDQQAKLGVDFAIDKLG--AKKIAVLHDKG 174

Query: 177 VYPRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSA 224
            Y +   +  + F+   G A   + E  TP G  DY  +V  ++   A
Sbjct: 175 DYGKGYAEYAKQFIEQSGKATVVLFEGVTP-GAVDYSAVVQKVRSEGA 221