Pairwise Alignments

Query, 455 a.a., putative iron-regulated membrane protein from Pseudomonas putida KT2440

Subject, 429 a.a., conserved hypothetical protein, putative iron uptake factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 10/124 (8%)

Query: 101 RELNVFVDPYSGKVLGEQDGKQNLQAIARALHGELMVGTV--------GDRLVELAAGWG 152
           R  +V+VD Y+G++ G+   +    A    +H  L+            G  +V ++    
Sbjct: 67  RRSSVYVDQYTGEITGKNQ-RSGFFAFMFRMHRWLLDSMNPGGEGIFWGKMIVGVSTLMF 125

Query: 153 IVLVVSGLYLWWPRGRSGAGVLWPRLSARG-RLFWRDLHAVTGFWGSALLLLMLVSGMTW 211
           +V+++SG+ +WWPR R            +G + FW DLH   G +   LLL M ++G+TW
Sbjct: 126 VVVLISGIIVWWPRTRKALKNSLKISGTKGWKRFWYDLHVAGGMYALVLLLAMSLTGLTW 185

Query: 212 TGLW 215
           +  W
Sbjct: 186 SFTW 189



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 10/128 (7%)

Query: 274 HMMSDMPAAPQVSVQQVEDIATSRQVELGYSITLPTTADGVFTIAVFADDPRNDATLHVD 333
           + +  + AAP    Q +E +A +   ++  S  +  ++D   T  V    PR  ++++VD
Sbjct: 17  YFVKQVEAAPLPVDQLLEKVAATLPDDVSVS-GVSISSDPERTYQVSLSKPRR-SSVYVD 74

Query: 334 QYTGKVLADVRWHDYSPVARATELGVMLH-----EGKMFGALNQIIILLVCLMILLGSVS 388
           QYTG++    +   +          ++       EG  +G   ++I+ +  LM ++  +S
Sbjct: 75  QYTGEITGKNQRSGFFAFMFRMHRWLLDSMNPGGEGIFWG---KMIVGVSTLMFVVVLIS 131

Query: 389 GLVMWWKR 396
           G+++WW R
Sbjct: 132 GIIVWWPR 139