Pairwise Alignments

Query, 364 a.a., putative cobalt-precorrin-6A synthase from Pseudomonas putida KT2440

Subject, 449 a.a., cobalamin (vitamin B12) biosynthesis CbiD protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  176 bits (446), Expect = 1e-48
 Identities = 107/253 (42%), Positives = 141/253 (55%), Gaps = 9/253 (3%)

Query: 103 GSGVGTVTRPGLVLAVGEPAINPVPRRMISEHLQHLADACGYLGGFEVTVNVQGGEQLAL 162
           G+GVG VT PGL +AVGEPAINP PRR ++  +     A G+ G   VT  V  G+++A 
Sbjct: 186 GTGVGRVTLPGLPVAVGEPAINPEPRRQLAFAVHRECAAAGWRGTVRVTARVPEGQRMAR 245

Query: 163 KTMNPRLGILGGLSILGTSGIVRPFSCAAYIASIHQGIDVAHTNGYTHIAACTGNASEDT 222
            T+NPRLGI+GG+SILGT G VRP+S  A+ A++ QG+DVA   G T +   TG  SE  
Sbjct: 246 HTLNPRLGIVGGISILGTRGTVRPYSHDAWQAAVAQGLDVARAAGLTEVCLSTGRRSETL 305

Query: 223 MRRVY-GLPEIALIEMGDFVGAVLKHLRKVPVPRLTLCGGFGKISKLAAGHMDLHSRHSS 281
           + R Y  LP +A ++  DF    L    +    R+     FGK+ KLA G    H+  + 
Sbjct: 306 LMRAYPALPPLAFVQAADFAAFSLAAAAQRGFARVAWGCFFGKLVKLAQGLPHTHAHTAP 365

Query: 282 IDLPQLAGWAADIGADEALQAAISGANTSQQALAL-----AHAA---GIALGDAVCAHAL 333
           +DLP LA WAAD GA    +AA++ ANT+ QAL L     AH A    +A      AH  
Sbjct: 366 LDLPLLAQWAADAGAGAETRAAVADANTAGQALELLLADPAHTAVLRAVARRARDAAHGW 425

Query: 334 AFARSVVPAQVHV 346
                 V   VH+
Sbjct: 426 TGGAESVTVTVHL 438



 Score = 32.3 bits (72), Expect = 3e-05
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 23/87 (26%)

Query: 27 LAAAKLLLTGQRNDAVDITLPKGKVVQ-----------------------MRLEFCRLIG 63
          +AA +LLL G+  ++V + LP   V                          RL+  R   
Sbjct: 1  MAALRLLLRGEAPNSVTVPLPPFTVEDHAKGGSGDDAAPAGWLDVPVETVARLDGARAGT 60

Query: 64 ECAEAGTLKDAGDDPDVTHGALVYSQV 90
            A    +KD GDDPD TH A + + V
Sbjct: 61 RAALGVVIKDGGDDPDATHRARIEALV 87