Pairwise Alignments

Query, 923 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  246 bits (628), Expect = 5e-69
 Identities = 162/549 (29%), Positives = 292/549 (53%), Gaps = 29/549 (5%)

Query: 372 ERLRRISEERFSASRALAASDAEINAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVK 431
           E L ++  +      A   +      K+EFLA +SHE+RTP+NGV+G T  +L T L+  
Sbjct: 265 ETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNS 324

Query: 432 QRDYVQTIHSAGNELLTLINEILDISKLESRQIELDDVQFDLNALIEDCLNIFRAKAEQQ 491
           Q DY+QTI  + N LLT+IN+ILD SKLE+ ++ L+++ F+   ++E+ +N+    A ++
Sbjct: 325 QADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEK 384

Query: 492 NIELISFTQPQVPRVISGDPTRLRQALSSLLENALKNTDQGEILLVVALDQ-RGEVPRLR 550
            +E+     P++PR + GDP R++Q L++L+ N++K T++G I + V +   R +V  L+
Sbjct: 385 GLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQ 444

Query: 551 IAVQDSGEPLPAADREALLQAELHSHHFLSSNKLGGHLGLVIAKQLIGLMQGEFGIKSST 610
             V+D+G  +    +  L QA   +   +S    G  LGLVI ++L+  M GE  + S  
Sbjct: 445 FMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRL 504

Query: 611 GMGNTLWLTLPLDPSRLEQPPADLDSPLRDARVLVVDDNDTCRKVLVQQCSAWGMNV--- 667
             G+T W TL L  + L          L    +L+++ N     ++ Q     G+ V   
Sbjct: 505 HQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYR 564

Query: 668 SAVPSGKEALALLRTKAHLRDYFDAVLLDQNMPGMTGMQLAAKIKEDPSLNHDILVVMLT 727
           SA+P           + H+ DY    L        T ++L   ++   ++ H+++V + +
Sbjct: 565 SAIPE----------EQHVYDYVLLNLAPSKETNPTLVEL--WVQRALAMTHNVIVGVPS 612

Query: 728 GISNAPSKVIARNAGVKRILAKPVAGYTLKTTLAEELAQRGREQAMPASLPGIPQALDLP 787
                  +++ R     + ++KP++   L  TLA +     + Q    SLP  PQA  LP
Sbjct: 613 TELALADQLMQRYP--VKCISKPLSRKKLLQTLAAQ-----QPQLANTSLPK-PQADKLP 664

Query: 788 GDFRVLVAEDNSISTKVIRSMLGKLNLKPDTACNGEEALQAMKAQHYDLVLMDCEMPILD 847
               V+  +DN  + K+I ++L +      +  +G+EA++  +++ +D++LMD +MP +D
Sbjct: 665 --LCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMD 722

Query: 848 GFSATQQLRAWEAENQRQRTPVVALTAHILAEHKERARLAGMDGHMAKPVELSQLRELIQ 907
           G +A + ++  +       TPV+A+TAH +A  ++R   AGMD ++ KP+E   L++++ 
Sbjct: 723 GVTACKAIKQLKGYRD---TPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLV 779

Query: 908 YWANHREAK 916
           +W+ H  +K
Sbjct: 780 HWSPHTRSK 788