Pairwise Alignments

Query, 923 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1047 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  202 bits (514), Expect = 9e-56
 Identities = 135/412 (32%), Positives = 225/412 (54%), Gaps = 28/412 (6%)

Query: 386 RALAASDAEINAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAGNE 445
           +A  A+++   AK EFLA +SHEIRTPMNG+LGMT+L L + L+ +QRDY++ + S+ + 
Sbjct: 524 QAKEAAESANRAKGEFLANMSHEIRTPMNGILGMTDLALDSALTPEQRDYLEMVKSSADA 583

Query: 446 LLTLINEILDISKLESRQIELDDVQFDLNALIEDCLNIFRAKAEQQNIELISFTQPQVPR 505
           LL +IN+ILD SK+E+ ++EL+ + F L  L+ + L     +A Q+++ L      +V  
Sbjct: 584 LLVIINDILDFSKIEAGKLELEHIHFHLRQLLRETLKPLELRARQRSLTLRCEVPEEVAD 643

Query: 506 VISGDPTRLRQALSSLLENALKNTDQGEILLVVALDQRGEVPRLRIAVQDSGEPLPAADR 565
              GDP RLRQ L +L+ NA+K T++G++   V ++ R  +  L  AV D+G  +PA  +
Sbjct: 644 GYLGDPGRLRQVLINLVGNAIKFTEEGQV--AVRVEARDGL--LHFAVSDTGIGIPADKQ 699

Query: 566 EALLQAELHSHHFLSSNKLGGHLGLVIAKQLIGLMQGEFGIKSSTGMGNTLWLTLPLDPS 625
           + + +A   +   ++    G  LGL I  +L+ LM G   ++S  G G+T   T     +
Sbjct: 700 QLIFEAFSQADSSVTRRFGGTGLGLTICTRLVRLMGGHMWVESDPGQGSTFHFT-----A 754

Query: 626 RLEQPPADLDSPLRDA----------RVLVVDDNDTCRKVLVQQCSAWGMNVSAVPSGKE 675
           RLE      +S   DA          R+LV +DN   +K+++      G  V+   +G++
Sbjct: 755 RLEAVAGPAESGEADAGRGEVVLPPLRLLVAEDNPVNQKLVLTLLQKRGHRVTLADNGQQ 814

Query: 676 ALALLRTKAHLRDYFDAVLLDQNMPGMTGMQLAAKIKEDPSLNHD---ILVVMLTGISNA 732
           ALA L T     D+FD VL+D  MP M G++   +I+   +   D   + +V +T  + A
Sbjct: 815 ALAALAT-----DHFDLVLMDMQMPVMGGLEATRRIRAAEAARGDGQHLPIVAMTANAMA 869

Query: 733 PSKVIARNAGVKRILAKPVAGYTLKTTLAEEL-AQRGREQAMPASLPGIPQA 783
             + +   AG+   ++KP+      + +A+ L  +R R+    A++P   QA
Sbjct: 870 GDRELCLEAGMDGYVSKPLRRDEFFSAMADVLPPERLRQAGAAAAIPADGQA 921



 Score = 94.4 bits (233), Expect = 3e-23
 Identities = 47/108 (43%), Positives = 74/108 (68%), Gaps = 1/108 (0%)

Query: 791 RVLVAEDNSISTKVIRSMLGKLNLKPDTACNGEEALQAMKAQHYDLVLMDCEMPILDGFS 850
           R+LVAEDN ++ K++ ++L K   +   A NG++AL A+   H+DLVLMD +MP++ G  
Sbjct: 781 RLLVAEDNPVNQKLVLTLLQKRGHRVTLADNGQQALAALATDHFDLVLMDMQMPVMGGLE 840

Query: 851 ATQQLRAWE-AENQRQRTPVVALTAHILAEHKERARLAGMDGHMAKPV 897
           AT+++RA E A    Q  P+VA+TA+ +A  +E    AGMDG+++KP+
Sbjct: 841 ATRRIRAAEAARGDGQHLPIVAMTANAMAGDRELCLEAGMDGYVSKPL 888