Pairwise Alignments

Query, 923 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  277 bits (709), Expect = 3e-78
 Identities = 184/564 (32%), Positives = 288/564 (51%), Gaps = 13/564 (2%)

Query: 363  GLLLNLAVSERLRRISEERFSASRALAASDAEINAKAEFLAKISHEIRTPMNGVLGMTEL 422
            G ++ + V    R++ EE    +RA A    E  AK+ FLA +SHEIRTPMN ++GM  L
Sbjct: 546  GGMVGVVVDISERKLMEEELRRARATAEEATE--AKSLFLANMSHEIRTPMNAIIGMAHL 603

Query: 423  LLGTPLSVKQRDYVQTIHSAGNELLTLINEILDISKLESRQIELDDVQFDLNALIEDCLN 482
             + T L+ KQRDYV  IH+A   LL +IN+ILD SK+E+ ++ L+ V F L  ++++   
Sbjct: 604  AMKTELTPKQRDYVGKIHNAAISLLGIINDILDFSKIEAGKLSLEYVPFSLEDVLDNVSG 663

Query: 483  IFRAKAEQQNIELISFTQPQVPRVISGDPTRLRQALSSLLENALKNTDQGEILLVV-ALD 541
            +   KA ++ +EL+       P  + GDP RL Q L++L+ NA+K T++G+I L    +D
Sbjct: 664  LLGLKANEKGLELLFNVNAGTPAGLVGDPLRLNQILTNLVSNAIKFTERGQITLTTRPVD 723

Query: 542  QRGEVPRLRIAVQDSGEPLPAADREALLQAELHSHHFLSSNKLGGHLGLVIAKQLIGLMQ 601
            Q G+  +L+  ++D G  +       L QA   +    +    G  LGL I+++L+ +M 
Sbjct: 724  QAGDRVKLQFWIEDMGIGMSREQLLHLFQAFTQADGSTTRKYGGTGLGLSISRRLVEMMG 783

Query: 602  GEFGIKSSTGMGNTLWLTLPLDPSRLEQPPADLDSPLRDARVLVVDDNDTCRKVLVQQCS 661
            G     S+ G G+T   T     +     P  L + L   RVLV DDN   R++L +   
Sbjct: 784  GTIWADSTLGEGSTFCFTAWFGRAEELARPRTLPASLAGLRVLVADDNGAAREILGEALR 843

Query: 662  AWGMNVSAVPSGKEALALLRTKAHLRDYFDAVLLDQNMPGMTGMQLAAKIKEDPSLNHDI 721
               +    V SG EALA L       D +  + LD  MP + G+    K+++        
Sbjct: 844  HLDLRPDLVASGAEALAQLTEMQGGADPYRVLFLDWQMPDLDGVSTLHKLQQALPQAQWP 903

Query: 722  LVVMLTGISNAPSKVIARNAGVKRILAKPVAGYTLKTTLAEELAQRGREQAMPASLPGIP 781
             VVM+T       +    N G+  IL KPV+  TL   L   L       A P  +    
Sbjct: 904  RVVMVTAYDQEELRRQTENLGICGILVKPVSASTLFDVLV-SLVDADNAPATPLHIAAPQ 962

Query: 782  QALDLPGDFRVLVAEDNSISTKVIRSMLGKLNLKPDTACNGEEALQAMKA---QHYDLVL 838
              +D     R+L+AEDN I+ ++   +L  +  +   A +G +A++ ++      +DLVL
Sbjct: 963  TRID---GMRILLAEDNEINQQIAVELLQSMGAQVTVAGDGLQAVELLERSPDDSFDLVL 1019

Query: 839  MDCEMPILDGFSATQQLRAWEAENQRQRTPVVALTAHILAEHKERARLAGMDGHMAKPVE 898
            MD +MP LDG+ AT++LR    + +    P++A+TAH + E +ER    GM+ H+AKP++
Sbjct: 1020 MDLQMPHLDGYDATERLR---CQQRFAHLPILAMTAHAMPEERERCLAIGMNDHLAKPID 1076

Query: 899  LSQLRELIQYWANHREAKVDPAHT 922
             + L   +  W   R     PA T
Sbjct: 1077 PTALAATLARWYEERPGASAPAPT 1100