Pairwise Alignments

Query, 629 a.a., transpeptidase (penicillin-binding protein 2) from Pseudomonas putida KT2440

Subject, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (411), Expect = 3e-44
 Identities = 167/603 (27%), Positives = 268/603 (44%), Gaps = 83/603 (13%)

Query: 17  VRKRVVVGAVAIMLLVCVLIARLYYLQIIQYDYHSTLSENNRVHVQPIPPTRGLIFDRNG 76
           +R R  +    ++   C L+AR+ Y+QII+ D      +   +  + +   RG+I DRNG
Sbjct: 26  IRWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNG 85

Query: 77  VIVADNRPSFSL---SMTRERAGNWQEVLDTIVEVLDLTADDRALFEKRMRQGR-RPFEP 132
             +A + P  ++    +   + G   E  D    + D+   DR    K++   R R F  
Sbjct: 86  EALAVSVPVEAVWADPVAIYKEGGLVE-KDRWYALADVLGLDRQEMMKKIEDNRSRRF-- 142

Query: 133 VPILFELNEEQIARVAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYVGRINEKELKTLD 192
             I  +          + + +L G+ +  +  R+YP G   AH VG              
Sbjct: 143 --IYLQRQVSPAMAKYIRELKLAGIGLKEESRRYYPAGEVSAHLVG-------------- 186

Query: 193 PVNYSGTHHIGKTGIERFYEAALHGQVGYEEVETNARGRVLRVLKRTDPKPGKDIVLSLD 252
               +G    G  G+ER +++ L G+ G      +  GRV+  +   + + GK I L++D
Sbjct: 187 ---VTGIDGHGLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTID 243

Query: 253 IKLQ----EAAEAALGGRR---GAVVALDPRTGEVLAMVSQPSFDPNLFVTGISFKAYAE 305
            +LQ     A + A+   R    + V LD +TG VLAMV+ PS++PN      SFK    
Sbjct: 244 QRLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNNRNDWQSFK---- 299

Query: 306 LRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVNASSRVFDPGYYQLPNYDHKYR 365
                   + NRV+   + PGST+KP V +A L +G+ + ++ + D G   +     + R
Sbjct: 300 --------MRNRVITDAFEPGSTVKPFVVLAALANGIADKNT-IIDTGDGTMQIGGSRVR 350

Query: 366 NWNRSGDGWVDLDTAIMRSNDTYFYDLAHKMGIDRLSSYMNKFGIGQRVSLDMFEESAGL 425
           + ++ G    DL   + +S++     LA +M ++ L    +  G+G+   LD+  E+ G+
Sbjct: 351 DTSKVGK--ADLTLILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGI 408

Query: 426 MPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALIANKGVWNRPHLAKTIE 485
            P+R      RR + F   TL  G G   +  TP+QLA A A + N G +   H+ K   
Sbjct: 409 FPNR------RRWSQFEIATLSFGYG---LAITPIQLAHAYATLGNHGKYQPIHIIK--- 456

Query: 486 GLPPVDDNPMEDIVLRDKSDWAKVTHGMEQVMHNARGTARKAAAGAQYRIAGKSGTA-QV 544
                 D   E   + D     +V   +E V     GTA +AA    YRIA KSGT+ + 
Sbjct: 457 -----GDQHGETRQVVDPKYVNQVLEMLETVTQPG-GTATRAAVPG-YRIAAKSGTSRKA 509

Query: 545 VAIKQGEKYDRNKLQERHRDHALFVAFAPAEAPKIVVSVMVE--NGES--GSGVAAPVVR 600
           +A    ++Y            A     AP   P+I + VMV    G+S  G  VA PV  
Sbjct: 510 IAGGYSDEY-----------FAYTAGVAPVSDPRISLVVMVNEPQGDSYYGGAVAGPVFS 558

Query: 601 QIM 603
           +IM
Sbjct: 559 EIM 561