Pairwise Alignments

Query, 348 a.a., membrane-bound lytic murein transglycosylase B from Pseudomonas putida KT2440

Subject, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (392), Expect = 1e-42
 Identities = 99/296 (33%), Positives = 154/296 (52%), Gaps = 17/296 (5%)

Query: 56  EMSRDYGFAPEQLMGVFREVQRKQSILDAISRPAERVKPWKDYRPMFITDARIARGVDFW 115
           + +R+ G +   L   FR+V+ K   + A     E+     +Y P  + + ++ +    +
Sbjct: 33  QQAREEGISERILNEAFRDVEYKPRSVVADKNQPEKKLTLDEYIPRAVPEWKVKQAQSLY 92

Query: 116 RQHEAVLARAEQEYGVPAQYIVAIIGVETFFGRNTGNYRVIDALSTLGFDYPPRAEFFRK 175
            +H   L R  ++YGV  ++IVA+ GVE+ FG  TGN+RVIDALSTL ++   R EFFRK
Sbjct: 93  EKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFRVIDALSTLAYE-GRREEFFRK 151

Query: 176 ELREFLLLAREEQLDPLTLKGSYAGAMGLPQFMPSSFRNYAVDFDGDGHINIWNNPDDAI 235
           E    L +  +  + P  +KGS+AGAMG  QFMPSSF N+A D +GDG  +IW    D  
Sbjct: 152 ETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFAADGNGDGKKDIWGTRSDVF 211

Query: 236 GSVASYFKRHGWVAGEGVVSRAWVEGERADEGLTTGI-----EPVKTVGELRTLGWSVHD 290
            S A+Y  + GW          W    +  +G    +     E  KT+ E   LG + +D
Sbjct: 212 ASTANYLSQSGWDD-----KYTWGRQVKIPKGFDHALEGRQPEKGKTLQEWSKLGVTRYD 266

Query: 291 -----SLRDDLPVTAFRLEGESGPEYWMGLKNFYAITRYNRSVMYAMAVHQLAEQL 341
                +L DD+       + E+G  Y +   N+  + ++NRS  +A+AV  LA+++
Sbjct: 267 GKPLPALSDDIKAWLIMPDDEAGRIY-LVYNNYNVLMKWNRSHYFALAVSHLADRI 321